BLASTX nr result

ID: Coptis23_contig00042784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042784
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265760.1| PREDICTED: uncharacterized protein LOC100258...   102   4e-20
emb|CAN65927.1| hypothetical protein VITISV_035287 [Vitis vinifera]    99   5e-19
ref|XP_002521032.1| conserved hypothetical protein [Ricinus comm...    94   2e-17
ref|XP_002314734.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
gb|AFK33729.1| unknown [Lotus japonicus]                               79   3e-13

>ref|XP_002265760.1| PREDICTED: uncharacterized protein LOC100258629 [Vitis vinifera]
          Length = 346

 Score =  102 bits (253), Expect = 4e-20
 Identities = 56/81 (69%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
 Frame = -3

Query: 237 ETWPFHPNLAPQPPMEFYNHFNQQPIKITPSMSSLEALLSKLPSVVPTTS--SSGYCEPT 64
           + W F    AP P  EFY+HFNQ P+KITPSMSSLEALLSKLPSVVP +S  +SGYCE  
Sbjct: 235 DAWHFQGTPAPAP--EFYDHFNQ-PMKITPSMSSLEALLSKLPSVVPVSSQPTSGYCESQ 291

Query: 63  QQFLSSQRPLELMGMGNVAKE 1
            QFLSSQRPLEL+GM  V KE
Sbjct: 292 PQFLSSQRPLELLGMEKVTKE 312


>emb|CAN65927.1| hypothetical protein VITISV_035287 [Vitis vinifera]
          Length = 346

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 55/81 (67%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
 Frame = -3

Query: 237 ETWPFHPNLAPQPPMEFYNHFNQQPIKITPSMSSLEALLSKLPSVVPTTS--SSGYCEPT 64
           + W F    A  P  EFY+HFNQ P+KITPSMSSLEALLSKLPSVVP +S  +SGYCE  
Sbjct: 235 DAWHFQGTPAHAP--EFYDHFNQ-PMKITPSMSSLEALLSKLPSVVPVSSQPTSGYCESQ 291

Query: 63  QQFLSSQRPLELMGMGNVAKE 1
            QFLSSQRPLEL+GM  V KE
Sbjct: 292 PQFLSSQRPLELLGMEKVTKE 312


>ref|XP_002521032.1| conserved hypothetical protein [Ricinus communis]
           gi|223539869|gb|EEF41449.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 366

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 50/84 (59%), Positives = 59/84 (70%), Gaps = 5/84 (5%)
 Frame = -3

Query: 237 ETWPFHPNLAPQPPMEFYN-HFNQQPIKITPSMSSLEALLSKLPSVVPTTSSSGYC---- 73
           ++W +   +AP  P E+Y+ HFNQ P KITPSMSSLEALLSKLPSVVP    SGYC    
Sbjct: 234 DSWHYQGTIAP--PTEYYHDHFNQVPFKITPSMSSLEALLSKLPSVVPPQPGSGYCTTES 291

Query: 72  EPTQQFLSSQRPLELMGMGNVAKE 1
           +P  Q+LS+QRP   MGM  VAKE
Sbjct: 292 QPQSQYLSTQRPAAFMGMEKVAKE 315


>ref|XP_002314734.1| predicted protein [Populus trichocarpa] gi|222863774|gb|EEF00905.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 47/87 (54%), Positives = 57/87 (65%), Gaps = 8/87 (9%)
 Frame = -3

Query: 237 ETWPFH-PNLAPQPPMEFYNHFNQQPIKITPSMSSLEALLSKLPSVVPTT-------SSS 82
           +TW +   N+APQ P EFY+HFNQ P KITPSMSSLEALLSKLPSVVP          ++
Sbjct: 235 DTWHYQGSNIAPQSPTEFYDHFNQVPFKITPSMSSLEALLSKLPSVVPPPQPAAAHHQAA 294

Query: 81  GYCEPTQQFLSSQRPLELMGMGNVAKE 1
           GYC+    ++SS +     GM  VAKE
Sbjct: 295 GYCDSQSHYVSSIQ----RGMEKVAKE 317


>gb|AFK33729.1| unknown [Lotus japonicus]
          Length = 366

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 47/80 (58%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = -3

Query: 237 ETWPFHPNLAPQPPMEFYNHFNQQPIKITPSMSSLEALLSKLPSVVPTTSSSGYCEPTQQ 58
           E W F  NLAP  P E YN     P+KITPSMSSLEALLSKLPSV+P         P   
Sbjct: 235 EQWHFQGNLAP--PAELYNEHYNLPLKITPSMSSLEALLSKLPSVIPPHLPPPTQPPQSH 292

Query: 57  FL-SSQRPLELMGMGNVAKE 1
            L S QRPLE MGM  VAKE
Sbjct: 293 VLPSQQRPLEFMGMQKVAKE 312


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