BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042767
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              100   2e-19
ref|XP_003560741.1| PREDICTED: uncharacterized protein LOC100824...    97   1e-18
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]    96   2e-18
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    92   4e-17
emb|CAN66359.1| hypothetical protein VITISV_018312 [Vitis vinifera]    91   8e-17

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/79 (59%), Positives = 59/79 (74%)
 Frame = -1

Query: 245  LWCDNISAISLASNPVFHARIKHIEVDYHFVRELVTSKAIQIKCVCSQDQLADILTKGLS 66
            +WCDNIS+ISLASNPVFH+R KHIEVDYH+VR+ V  + + +  V + DQ ADI TKGLS
Sbjct: 1293 IWCDNISSISLASNPVFHSRTKHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKGLS 1352

Query: 65   KQRHLYLQPKLSVVSKPTS 9
             QR  +L  KL V ++P S
Sbjct: 1353 TQRFQFLASKLPVRARPLS 1371


>ref|XP_003560741.1| PREDICTED: uncharacterized protein LOC100824035 [Brachypodium
           distachyon]
          Length = 270

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/68 (69%), Positives = 53/68 (77%)
 Frame = -1

Query: 269 LSQDH*KLLWCDNISAISLASNPVFHARIKHIEVDYHFVRELVTSKAIQIKCVCSQDQLA 90
           +SQD   +LWCDNI A  L+SNPVFHAR KHIEVDYHFVRE V  K +QIK + S+DQLA
Sbjct: 74  ISQDQPPVLWCDNIGATYLSSNPVFHARTKHIEVDYHFVRERVAQKLLQIKFISSKDQLA 133

Query: 89  DILTKGLS 66
           DI TK LS
Sbjct: 134 DIFTKPLS 141


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/78 (53%), Positives = 61/78 (78%)
 Frame = -1

Query: 248 LLWCDNISAISLASNPVFHARIKHIEVDYHFVRELVTSKAIQIKCVCSQDQLADILTKGL 69
           +L+CDN+S   LA+NP+ H+R KH+E+DYHFVRE V  K + ++ + S+DQ+ADILTK L
Sbjct: 244 VLYCDNLSTTYLAANPILHSRAKHVEIDYHFVRERVLQKTLDVRFLPSEDQVADILTKSL 303

Query: 68  SKQRHLYLQPKLSVVSKP 15
           S Q  L+L+ KL+V+S+P
Sbjct: 304 STQHFLHLRSKLTVLSRP 321


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/78 (53%), Positives = 60/78 (76%)
 Frame = -1

Query: 248  LLWCDNISAISLASNPVFHARIKHIEVDYHFVRELVTSKAIQIKCVCSQDQLADILTKGL 69
            +L+ DN+S   LA+NPV H+R KH+E+DYHFVRE V  K + ++ + S+DQ+ DILTK L
Sbjct: 1038 VLYYDNLSTTYLATNPVLHSRAKHVEIDYHFVRERVLPKTLDVRFLPSKDQVVDILTKAL 1097

Query: 68   SKQRHLYLQPKLSVVSKP 15
            S QR L+L+ KL+V+S+P
Sbjct: 1098 STQRFLHLRSKLTVLSRP 1115


>emb|CAN66359.1| hypothetical protein VITISV_018312 [Vitis vinifera]
          Length = 542

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 44/88 (50%), Positives = 61/88 (69%)
 Frame = -1

Query: 272 QLSQDH*KLLWCDNISAISLASNPVFHARIKHIEVDYHFVRELVTSKAIQIKCVCSQDQL 93
           ++S D   ++WCDNISA++LASN +FHAR KHIEVDYHFVRE V  + I ++ + +  Q 
Sbjct: 438 EISLDXXPVIWCDNISALALASNXIFHARSKHIEVDYHFVREKVAHRDIILEHISTSIQP 497

Query: 92  ADILTKGLSKQRHLYLQPKLSVVSKPTS 9
           ADI TKG +     +L+ KL++   PTS
Sbjct: 498 ADIFTKGHTADXFCFLRDKLAICDLPTS 525