BLASTX nr result

ID: Coptis23_contig00042735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042735
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608007.1| Gibberellin receptor GID1 [Medicago truncatu...    47   7e-10
ref|XP_002518792.1| catalytic, putative [Ricinus communis] gi|22...    44   1e-09
gb|AFV95090.1| carboxylesterase 1 [Solanum habrochaites]               54   2e-09
gb|AFV95086.1| carboxylesterase 1 [Solanum pimpinellifolium]           54   2e-09
gb|AFV95085.1| carboxylesterase 1 [Solanum lycopersicum] gi|4109...    54   2e-09

>ref|XP_003608007.1| Gibberellin receptor GID1 [Medicago truncatula]
           gi|355509062|gb|AES90204.1| Gibberellin receptor GID1
           [Medicago truncatula]
          Length = 321

 Score = 46.6 bits (109), Expect(2) = 7e-10
 Identities = 20/35 (57%), Positives = 22/35 (62%)
 Frame = +1

Query: 1   WEAFHANGEGNEAWLRDYVYFNWVFLGGDSASANI 105
           W A H  G G++ WL  Y  F  VFLGGDSA ANI
Sbjct: 139 WVASHVGGNGSDEWLNQYADFEKVFLGGDSAGANI 173



 Score = 41.6 bits (96), Expect(2) = 7e-10
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = +3

Query: 105 IVHHMTIRAGELKLRNGLKLLGTILVQPYLWGEEQSGSE 221
           I HH++IR G+  L +G+KL G+  + PY WG ++ GSE
Sbjct: 173 IAHHLSIRVGKENL-DGVKLEGSFYIHPYFWGVDRIGSE 210


>ref|XP_002518792.1| catalytic, putative [Ricinus communis] gi|223542173|gb|EEF43717.1|
           catalytic, putative [Ricinus communis]
          Length = 316

 Score = 43.9 bits (102), Expect(2) = 1e-09
 Identities = 20/35 (57%), Positives = 20/35 (57%)
 Frame = +1

Query: 1   WEAFHANGEGNEAWLRDYVYFNWVFLGGDSASANI 105
           W A H NG G E WL  Y     VFL GDSA ANI
Sbjct: 134 WVASHLNGNGAEEWLNSYADIGKVFLAGDSAGANI 168



 Score = 43.5 bits (101), Expect(2) = 1e-09
 Identities = 21/39 (53%), Positives = 26/39 (66%)
 Frame = +3

Query: 105 IVHHMTIRAGELKLRNGLKLLGTILVQPYLWGEEQSGSE 221
           I HHM IR  E KL  G+ L+G +LV PY WG+E  G+E
Sbjct: 168 IAHHMAIRNTEEKLV-GINLVGIVLVHPYFWGKEPVGNE 205


>gb|AFV95090.1| carboxylesterase 1 [Solanum habrochaites]
          Length = 339

 Score = 54.3 bits (129), Expect(2) = 2e-09
 Identities = 23/35 (65%), Positives = 25/35 (71%)
 Frame = +1

Query: 1   WEAFHANGEGNEAWLRDYVYFNWVFLGGDSASANI 105
           W   HANG+G E WL+DY  FN VFLGGDSA  NI
Sbjct: 130 WVTSHANGDGREPWLKDYADFNRVFLGGDSAGGNI 164



 Score = 32.7 bits (73), Expect(2) = 2e-09
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 105 IVHHMTIRAGELKLRNGLKLLGTILVQPYLWGEEQSGSE 221
           I HH+ IR G L+   G+K+ G  L  PY WG+++   E
Sbjct: 164 IAHHIGIRLG-LEKFEGVKIDGIFLACPYFWGKDRIEGE 201


>gb|AFV95086.1| carboxylesterase 1 [Solanum pimpinellifolium]
          Length = 339

 Score = 54.3 bits (129), Expect(2) = 2e-09
 Identities = 23/35 (65%), Positives = 25/35 (71%)
 Frame = +1

Query: 1   WEAFHANGEGNEAWLRDYVYFNWVFLGGDSASANI 105
           W   HANG+G E WL+DY  FN VFLGGDSA  NI
Sbjct: 130 WVTSHANGDGREPWLKDYADFNRVFLGGDSAGGNI 164



 Score = 32.7 bits (73), Expect(2) = 2e-09
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 105 IVHHMTIRAGELKLRNGLKLLGTILVQPYLWGEEQSGSE 221
           I HH+ IR G L+   G+K+ G  L  PY WG+++   E
Sbjct: 164 IAHHIGIRLG-LEKFEGVKIDGIFLACPYFWGKDRIEGE 201


>gb|AFV95085.1| carboxylesterase 1 [Solanum lycopersicum]
           gi|410991986|gb|AFV95087.1| carboxylesterase 1 [Solanum
           cheesmaniae] gi|410991990|gb|AFV95089.1|
           carboxylesterase 1 [Solanum galapagense]
          Length = 339

 Score = 54.3 bits (129), Expect(2) = 2e-09
 Identities = 23/35 (65%), Positives = 25/35 (71%)
 Frame = +1

Query: 1   WEAFHANGEGNEAWLRDYVYFNWVFLGGDSASANI 105
           W   HANG+G E WL+DY  FN VFLGGDSA  NI
Sbjct: 130 WVTSHANGDGREPWLKDYADFNRVFLGGDSAGGNI 164



 Score = 32.7 bits (73), Expect(2) = 2e-09
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 105 IVHHMTIRAGELKLRNGLKLLGTILVQPYLWGEEQSGSE 221
           I HH+ IR G L+   G+K+ G  L  PY WG+++   E
Sbjct: 164 IAHHIGIRLG-LEKFEGVKIDGIFLACPYFWGKDRIEGE 201


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