BLASTX nr result

ID: Coptis23_contig00042708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042708
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264591.1| PREDICTED: uncharacterized membrane protein ...   132   4e-29
ref|XP_002264502.1| PREDICTED: uncharacterized membrane protein ...   132   4e-29
ref|XP_002518432.1| conserved hypothetical protein [Ricinus comm...   129   3e-28
ref|XP_002301612.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28
ref|XP_002321139.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28

>ref|XP_002264591.1| PREDICTED: uncharacterized membrane protein C24H6.13 isoform 2
           [Vitis vinifera]
          Length = 766

 Score =  132 bits (331), Expect = 4e-29
 Identities = 62/93 (66%), Positives = 71/93 (76%)
 Frame = +2

Query: 5   FVSFKSRWGAAVSAQTQQSRDPTMWLTEWAPEPRDVYWHNLAVPFVTLTIRRLXXXXXXX 184
           FVSFK+RWGAAV AQTQQSR+PT+WLTEWAPEPRDVYWHNLA+PFV+LT+RRL       
Sbjct: 322 FVSFKTRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVYWHNLAIPFVSLTVRRLIIAVAFF 381

Query: 185 XXXXXXXXXXXXVQSLANITGIEKAAPFLKPVI 283
                       VQSLA+I GIEKA PFL+P+I
Sbjct: 382 FLTFFYMIPIAFVQSLASIEGIEKAVPFLRPII 414


>ref|XP_002264502.1| PREDICTED: uncharacterized membrane protein C24H6.13 isoform 1
           [Vitis vinifera] gi|302144095|emb|CBI23200.3| unnamed
           protein product [Vitis vinifera]
          Length = 771

 Score =  132 bits (331), Expect = 4e-29
 Identities = 62/93 (66%), Positives = 71/93 (76%)
 Frame = +2

Query: 5   FVSFKSRWGAAVSAQTQQSRDPTMWLTEWAPEPRDVYWHNLAVPFVTLTIRRLXXXXXXX 184
           FVSFK+RWGAAV AQTQQSR+PT+WLTEWAPEPRDVYWHNLA+PFV+LT+RRL       
Sbjct: 322 FVSFKTRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVYWHNLAIPFVSLTVRRLIIAVAFF 381

Query: 185 XXXXXXXXXXXXVQSLANITGIEKAAPFLKPVI 283
                       VQSLA+I GIEKA PFL+P+I
Sbjct: 382 FLTFFYMIPIAFVQSLASIEGIEKAVPFLRPII 414


>ref|XP_002518432.1| conserved hypothetical protein [Ricinus communis]
           gi|223542277|gb|EEF43819.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 773

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/93 (65%), Positives = 70/93 (75%)
 Frame = +2

Query: 5   FVSFKSRWGAAVSAQTQQSRDPTMWLTEWAPEPRDVYWHNLAVPFVTLTIRRLXXXXXXX 184
           FVSFK+RWGAAV AQTQQSR+PT+WLT+WAPEPRDVYWHNLA+P+V+L IRRL       
Sbjct: 322 FVSFKTRWGAAVCAQTQQSRNPTLWLTDWAPEPRDVYWHNLAIPYVSLAIRRLIMGVAFF 381

Query: 185 XXXXXXXXXXXXVQSLANITGIEKAAPFLKPVI 283
                       VQSLA+I GIEK APFLKP+I
Sbjct: 382 FLTFFFMIPIAFVQSLASIEGIEKRAPFLKPII 414


>ref|XP_002301612.1| predicted protein [Populus trichocarpa] gi|222843338|gb|EEE80885.1|
           predicted protein [Populus trichocarpa]
          Length = 763

 Score =  128 bits (321), Expect = 5e-28
 Identities = 62/93 (66%), Positives = 68/93 (73%)
 Frame = +2

Query: 5   FVSFKSRWGAAVSAQTQQSRDPTMWLTEWAPEPRDVYWHNLAVPFVTLTIRRLXXXXXXX 184
           FVSFK+RWGAAV AQTQQSR+P MWLTEWAPEPRDVYW NLA+PFV+L +RRL       
Sbjct: 316 FVSFKTRWGAAVCAQTQQSRNPAMWLTEWAPEPRDVYWDNLAIPFVSLALRRLVIAVTFF 375

Query: 185 XXXXXXXXXXXXVQSLANITGIEKAAPFLKPVI 283
                       VQSLANI GIEKA PFLKP+I
Sbjct: 376 FLTFFFMVPIAFVQSLANIEGIEKALPFLKPII 408


>ref|XP_002321139.1| predicted protein [Populus trichocarpa] gi|222861912|gb|EEE99454.1|
           predicted protein [Populus trichocarpa]
          Length = 768

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/93 (66%), Positives = 69/93 (74%)
 Frame = +2

Query: 5   FVSFKSRWGAAVSAQTQQSRDPTMWLTEWAPEPRDVYWHNLAVPFVTLTIRRLXXXXXXX 184
           FVSFK+RWGAAV AQTQQSR+PT+WLT WAPEPRDVYW NLA+PFV+LT+RRL       
Sbjct: 320 FVSFKTRWGAAVCAQTQQSRNPTIWLTGWAPEPRDVYWDNLAIPFVSLTLRRLVIAVAFF 379

Query: 185 XXXXXXXXXXXXVQSLANITGIEKAAPFLKPVI 283
                       VQSLANI GIEKA PFLKP+I
Sbjct: 380 FLTFFFMIPIAFVQSLANIEGIEKALPFLKPII 412


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