BLASTX nr result

ID: Coptis23_contig00042684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042684
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318999.1| predicted protein [Populus trichocarpa] gi|2...   187   8e-46
emb|CBI39481.3| unnamed protein product [Vitis vinifera]              184   7e-45
ref|XP_002284169.1| PREDICTED: uncharacterized protein LOC100257...   184   7e-45
emb|CAN77378.1| hypothetical protein VITISV_043863 [Vitis vinifera]   184   7e-45
ref|XP_002884510.1| hypothetical protein ARALYDRAFT_477828 [Arab...   177   6e-43

>ref|XP_002318999.1| predicted protein [Populus trichocarpa] gi|222857375|gb|EEE94922.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  187 bits (475), Expect = 8e-46
 Identities = 83/105 (79%), Positives = 95/105 (90%)
 Frame = -3

Query: 316 YQKPYSINESLWKIPDHRNVRWSNYVCRDFECLSSKNPKRGYSKCTGCFEMNKESVKWVS 137
           YQKPY INESLW++PD RNVRWS Y CR+F+CLSSKNPKRGYSKCTGCFEM+KE +KWV+
Sbjct: 86  YQKPYPINESLWRLPDDRNVRWSTYQCRNFQCLSSKNPKRGYSKCTGCFEMDKEKLKWVT 145

Query: 136 YTSVPADFLIGDVFTIKPGEIRIGLDFGVGTGTFAARMREKNVTI 2
            +S+P DFLI DV  IKPGEIRIGLDFGVGTGTFAARM+E+NVT+
Sbjct: 146 NSSLPVDFLIKDVLAIKPGEIRIGLDFGVGTGTFAARMKEQNVTV 190


>emb|CBI39481.3| unnamed protein product [Vitis vinifera]
          Length = 437

 Score =  184 bits (467), Expect = 7e-45
 Identities = 85/105 (80%), Positives = 92/105 (87%)
 Frame = -3

Query: 316 YQKPYSINESLWKIPDHRNVRWSNYVCRDFECLSSKNPKRGYSKCTGCFEMNKESVKWVS 137
           Y  PY INESLW+IPD RNVRWSNY CR+FECLSSKNPKRGYSKC GCFEM KE +KWV+
Sbjct: 238 YLGPYPINESLWRIPDGRNVRWSNYQCRNFECLSSKNPKRGYSKCAGCFEMEKEKLKWVT 297

Query: 136 YTSVPADFLIGDVFTIKPGEIRIGLDFGVGTGTFAARMREKNVTI 2
            +S+P DFLI DV  IKPGEIRIGLDFGVGTGTFAARMRE+NVTI
Sbjct: 298 NSSLPVDFLIRDVLGIKPGEIRIGLDFGVGTGTFAARMREQNVTI 342


>ref|XP_002284169.1| PREDICTED: uncharacterized protein LOC100257940 [Vitis vinifera]
          Length = 467

 Score =  184 bits (467), Expect = 7e-45
 Identities = 85/105 (80%), Positives = 92/105 (87%)
 Frame = -3

Query: 316 YQKPYSINESLWKIPDHRNVRWSNYVCRDFECLSSKNPKRGYSKCTGCFEMNKESVKWVS 137
           Y  PY INESLW+IPD RNVRWSNY CR+FECLSSKNPKRGYSKC GCFEM KE +KWV+
Sbjct: 238 YLGPYPINESLWRIPDGRNVRWSNYQCRNFECLSSKNPKRGYSKCAGCFEMEKEKLKWVT 297

Query: 136 YTSVPADFLIGDVFTIKPGEIRIGLDFGVGTGTFAARMREKNVTI 2
            +S+P DFLI DV  IKPGEIRIGLDFGVGTGTFAARMRE+NVTI
Sbjct: 298 NSSLPVDFLIRDVLGIKPGEIRIGLDFGVGTGTFAARMREQNVTI 342


>emb|CAN77378.1| hypothetical protein VITISV_043863 [Vitis vinifera]
          Length = 467

 Score =  184 bits (467), Expect = 7e-45
 Identities = 85/105 (80%), Positives = 92/105 (87%)
 Frame = -3

Query: 316 YQKPYSINESLWKIPDHRNVRWSNYVCRDFECLSSKNPKRGYSKCTGCFEMNKESVKWVS 137
           Y  PY INESLW+IPD RNVRWSNY CR+FECLSSKNPKRGYSKC GCFEM KE +KWV+
Sbjct: 238 YLGPYPINESLWRIPDGRNVRWSNYQCRNFECLSSKNPKRGYSKCAGCFEMEKEKLKWVT 297

Query: 136 YTSVPADFLIGDVFTIKPGEIRIGLDFGVGTGTFAARMREKNVTI 2
            +S+P DFLI DV  IKPGEIRIGLDFGVGTGTFAARMRE+NVTI
Sbjct: 298 NSSLPVDFLIRDVLGIKPGEIRIGLDFGVGTGTFAARMREQNVTI 342


>ref|XP_002884510.1| hypothetical protein ARALYDRAFT_477828 [Arabidopsis lyrata subsp.
           lyrata] gi|297330350|gb|EFH60769.1| hypothetical protein
           ARALYDRAFT_477828 [Arabidopsis lyrata subsp. lyrata]
          Length = 463

 Score =  177 bits (450), Expect = 6e-43
 Identities = 79/105 (75%), Positives = 90/105 (85%)
 Frame = -3

Query: 316 YQKPYSINESLWKIPDHRNVRWSNYVCRDFECLSSKNPKRGYSKCTGCFEMNKESVKWVS 137
           YQKPY INESLWK+PD RNVRW NY CR+F CLSSKNPKRGY+KC+GCFEM KE  KWV 
Sbjct: 234 YQKPYPINESLWKLPDDRNVRWGNYQCRNFACLSSKNPKRGYTKCSGCFEMEKEGDKWVK 293

Query: 136 YTSVPADFLIGDVFTIKPGEIRIGLDFGVGTGTFAARMREKNVTI 2
            +++  DF+I DV  +KPGEIR+GLD+GVGTGTFAARMREKNVTI
Sbjct: 294 NSTLLVDFMIEDVLRVKPGEIRLGLDYGVGTGTFAARMREKNVTI 338


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