BLASTX nr result

ID: Coptis23_contig00042679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042679
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523757.1| eukaryotic translation initiation factor 2c,...   101   7e-20
dbj|BAJ34113.1| unnamed protein product [Thellungiella halophila]     100   1e-19
gb|AFW87102.1| putative argonaute family protein [Zea mays]            99   3e-19
ref|XP_002526275.1| eukaryotic translation initiation factor 2c,...    99   3e-19
gb|ABL63484.1| argonaute 1 [Pisum sativum]                             99   3e-19

>ref|XP_002523757.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223537061|gb|EEF38697.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 987

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/99 (47%), Positives = 65/99 (65%), Gaps = 4/99 (4%)
 Frame = +1

Query: 1   FGIRISEDPTYAEARLLPPPLLNYHGTSCR----PTSGQWNMTGKKLFEGATVKSWTYLN 168
           FGI++ E+ T+ +AR+LP P+LNYH T       P  GQWNM  KK+  G +V  WT +N
Sbjct: 508 FGIQVKEELTFVDARVLPAPMLNYHETGRESRVDPRCGQWNMINKKMVNGGSVNFWTCVN 567

Query: 169 FALNVPKEVADEFCRKLADSCCTHGMAFNHSPEIPPYSA 285
           F+LN+ +++  EFCR+L   C + GMAFN +P IP  SA
Sbjct: 568 FSLNINRDLPAEFCRQLIQMCVSKGMAFNPNPIIPISSA 606


>dbj|BAJ34113.1| unnamed protein product [Thellungiella halophila]
          Length = 1084

 Score =  100 bits (250), Expect = 1e-19
 Identities = 48/99 (48%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
 Frame = +1

Query: 1   FGIRISEDPTYAEARLLPPPLLNYHGT----SCRPTSGQWNMTGKKLFEGATVKSWTYLN 168
           FGI+IS      EAR+LPPP L YH +    +C P  GQWNM  KK+  G TV +W  +N
Sbjct: 586 FGIKISATLASVEARILPPPWLKYHESGREGTCLPQVGQWNMMNKKMINGGTVSNWICIN 645

Query: 169 FALNVPKEVADEFCRKLADSCCTHGMAFNHSPEIPPYSA 285
           F+  VP+ +A  FC++LA  C   GMAFN  P +PP SA
Sbjct: 646 FSRQVPENLARTFCQELAQMCHVSGMAFNPEPVLPPVSA 684


>gb|AFW87102.1| putative argonaute family protein [Zea mays]
          Length = 984

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/99 (49%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
 Frame = +1

Query: 1   FGIRISEDPTYAEARLLPPPLLNYHGTS----CRPTSGQWNMTGKKLFEGATVKSWTYLN 168
           FGI ISE  TY EAR+LP P L YH T     C P  GQWNM  KK+  G  V  W  +N
Sbjct: 501 FGINISEKLTYVEARVLPAPWLKYHDTGKEKECLPQVGQWNMVNKKVINGCKVSHWACIN 560

Query: 169 FALNVPKEVADEFCRKLADSCCTHGMAFNHSPEIPPYSA 285
           F+ +VP+  A  FC++LA  C   GM FN  P +P YSA
Sbjct: 561 FSRSVPEATARGFCQELAQMCQISGMEFNSEPVMPIYSA 599


>ref|XP_002526275.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223534406|gb|EEF36112.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 1063

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/99 (50%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
 Frame = +1

Query: 1   FGIRISEDPTYAEARLLPPPLLNYHGTS----CRPTSGQWNMTGKKLFEGATVKSWTYLN 168
           FGI+ISE     EAR+LP P L YH T     C P  GQWNM  KK+  G TV +W  +N
Sbjct: 561 FGIKISEKLASVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNNWICIN 620

Query: 169 FALNVPKEVADEFCRKLADSCCTHGMAFNHSPEIPPYSA 285
           F+ NV   VA  FC +LA  C   GMAFN  P +PP SA
Sbjct: 621 FSRNVQDSVARGFCYELAQMCYISGMAFNPEPVLPPVSA 659


>gb|ABL63484.1| argonaute 1 [Pisum sativum]
          Length = 1100

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/99 (50%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
 Frame = +1

Query: 1   FGIRISEDPTYAEARLLPPPLLNYHGTS----CRPTSGQWNMTGKKLFEGATVKSWTYLN 168
           FGI+ISE     EAR+LP P L YH T     C P  GQWNM  KK+  G TV +W  +N
Sbjct: 601 FGIKISEKLAQVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNNWFCVN 660

Query: 169 FALNVPKEVADEFCRKLADSCCTHGMAFNHSPEIPPYSA 285
           F+ NV   VA  FC +LA  C   GMAFN  P +PP SA
Sbjct: 661 FSRNVQDSVARGFCDELAHMCYVSGMAFNPEPVVPPVSA 699


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