BLASTX nr result

ID: Coptis23_contig00042678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042678
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]    84   2e-14
emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera]    83   3e-14
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]               78   9e-13
emb|CAN66496.1| hypothetical protein VITISV_036886 [Vitis vinifera]    72   3e-12
emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]    75   4e-12

>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/68 (58%), Positives = 51/68 (75%)
 Frame = -2

Query: 272 LPIAHTGGISLSYASHSFQLSNVLHVPNIHKNLLSVAQFTHDNSVSITFYPSGFLICDLH 93
           LPI+HTG  SL+  SHSF LSNVL VP + +NL+S++QF   N+ SI F PS F + DLH
Sbjct: 193 LPISHTGSTSLTTPSHSFTLSNVLCVPTMKRNLISISQFCKSNNTSIEFLPSSFHVKDLH 252

Query: 92  TGSILVQG 69
           TG+IL+QG
Sbjct: 253 TGAILLQG 260


>emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera]
          Length = 424

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/68 (58%), Positives = 51/68 (75%)
 Frame = -2

Query: 272 LPIAHTGGISLSYASHSFQLSNVLHVPNIHKNLLSVAQFTHDNSVSITFYPSGFLICDLH 93
           LPI+HTG  SL+  SHSF LSNVL VP + +NL+S++QF   N+ SI F PS F + DLH
Sbjct: 326 LPISHTGSTSLTTPSHSFTLSNVLWVPIMKRNLISISQFCKSNNTSIEFLPSSFHVKDLH 385

Query: 92  TGSILVQG 69
           TG+IL+QG
Sbjct: 386 TGAILLQG 393


>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
          Length = 1534

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 6/92 (6%)
 Frame = -2

Query: 272 LPIAHTGGISLSYASHSFQLSNVLHVPNIHKNLLSVAQFTHDNSVSITFYPSGFLICDLH 93
           LPI HTG  +LS  S S  L+N+L+VPN+HKNL+SV +  + N VS+ F+P+ F + DL 
Sbjct: 461 LPITHTGSSTLSTQSRSLALNNILYVPNLHKNLISVYKLCNANKVSVEFFPAHFQVKDLS 520

Query: 92  TGSILVQG----PM*RWIIPHQT--KLFFSST 15
           TG+ L+QG     +  W +P  T   LF S T
Sbjct: 521 TGARLLQGRTKDELYEWPVPSNTPISLFASPT 552


>emb|CAN66496.1| hypothetical protein VITISV_036886 [Vitis vinifera]
          Length = 1092

 Score = 71.6 bits (174), Expect(2) = 3e-12
 Identities = 35/68 (51%), Positives = 46/68 (67%)
 Frame = -2

Query: 272 LPIAHTGGISLSYASHSFQLSNVLHVPNIHKNLLSVAQFTHDNSVSITFYPSGFLICDLH 93
           L IAH G  +LS  S S  L   LHVP IHKNL+S  +FTHDN+V+I F+P  +L+ D  
Sbjct: 237 LQIAHIGSTTLSSPSRSLMLKETLHVPLIHKNLISXHKFTHDNNVTIEFHPFFYLVKDRM 296

Query: 92  TGSILVQG 69
           TG+ L++G
Sbjct: 297 TGAXLMRG 304



 Score = 24.6 bits (52), Expect(2) = 3e-12
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 79  LFRGQCKDGLYPIKPSCSFQALTSSS 2
           L RG+C++G+YP+       AL SSS
Sbjct: 301 LMRGRCENGVYPV-------ALQSSS 319


>emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]
          Length = 590

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/76 (46%), Positives = 51/76 (67%)
 Frame = -2

Query: 272 LPIAHTGGISLSYASHSFQLSNVLHVPNIHKNLLSVAQFTHDNSVSITFYPSGFLICDLH 93
           LPI H+G ++LS+ +  FQ+ + L VP I+KNL+SV  FT  N+V + F+P+ FL+ D  
Sbjct: 334 LPITHSGSLTLSFPNRKFQVEDTLCVPTINKNLISVHHFTKQNNVILEFHPTYFLVKDRR 393

Query: 92  TGSILVQGPM*RWIIP 45
           TG IL+QGP    + P
Sbjct: 394 TGEILLQGPCENGVYP 409


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