BLASTX nr result
ID: Coptis23_contig00042678
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00042678 (273 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera] 84 2e-14 emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera] 83 3e-14 gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 78 9e-13 emb|CAN66496.1| hypothetical protein VITISV_036886 [Vitis vinifera] 72 3e-12 emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera] 75 4e-12 >emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera] Length = 1112 Score = 83.6 bits (205), Expect = 2e-14 Identities = 40/68 (58%), Positives = 51/68 (75%) Frame = -2 Query: 272 LPIAHTGGISLSYASHSFQLSNVLHVPNIHKNLLSVAQFTHDNSVSITFYPSGFLICDLH 93 LPI+HTG SL+ SHSF LSNVL VP + +NL+S++QF N+ SI F PS F + DLH Sbjct: 193 LPISHTGSTSLTTPSHSFTLSNVLCVPTMKRNLISISQFCKSNNTSIEFLPSSFHVKDLH 252 Query: 92 TGSILVQG 69 TG+IL+QG Sbjct: 253 TGAILLQG 260 >emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera] Length = 424 Score = 82.8 bits (203), Expect = 3e-14 Identities = 40/68 (58%), Positives = 51/68 (75%) Frame = -2 Query: 272 LPIAHTGGISLSYASHSFQLSNVLHVPNIHKNLLSVAQFTHDNSVSITFYPSGFLICDLH 93 LPI+HTG SL+ SHSF LSNVL VP + +NL+S++QF N+ SI F PS F + DLH Sbjct: 326 LPISHTGSTSLTTPSHSFTLSNVLWVPIMKRNLISISQFCKSNNTSIEFLPSSFHVKDLH 385 Query: 92 TGSILVQG 69 TG+IL+QG Sbjct: 386 TGAILLQG 393 >gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] Length = 1534 Score = 77.8 bits (190), Expect = 9e-13 Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 6/92 (6%) Frame = -2 Query: 272 LPIAHTGGISLSYASHSFQLSNVLHVPNIHKNLLSVAQFTHDNSVSITFYPSGFLICDLH 93 LPI HTG +LS S S L+N+L+VPN+HKNL+SV + + N VS+ F+P+ F + DL Sbjct: 461 LPITHTGSSTLSTQSRSLALNNILYVPNLHKNLISVYKLCNANKVSVEFFPAHFQVKDLS 520 Query: 92 TGSILVQG----PM*RWIIPHQT--KLFFSST 15 TG+ L+QG + W +P T LF S T Sbjct: 521 TGARLLQGRTKDELYEWPVPSNTPISLFASPT 552 >emb|CAN66496.1| hypothetical protein VITISV_036886 [Vitis vinifera] Length = 1092 Score = 71.6 bits (174), Expect(2) = 3e-12 Identities = 35/68 (51%), Positives = 46/68 (67%) Frame = -2 Query: 272 LPIAHTGGISLSYASHSFQLSNVLHVPNIHKNLLSVAQFTHDNSVSITFYPSGFLICDLH 93 L IAH G +LS S S L LHVP IHKNL+S +FTHDN+V+I F+P +L+ D Sbjct: 237 LQIAHIGSTTLSSPSRSLMLKETLHVPLIHKNLISXHKFTHDNNVTIEFHPFFYLVKDRM 296 Query: 92 TGSILVQG 69 TG+ L++G Sbjct: 297 TGAXLMRG 304 Score = 24.6 bits (52), Expect(2) = 3e-12 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -3 Query: 79 LFRGQCKDGLYPIKPSCSFQALTSSS 2 L RG+C++G+YP+ AL SSS Sbjct: 301 LMRGRCENGVYPV-------ALQSSS 319 >emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera] Length = 590 Score = 75.5 bits (184), Expect = 4e-12 Identities = 35/76 (46%), Positives = 51/76 (67%) Frame = -2 Query: 272 LPIAHTGGISLSYASHSFQLSNVLHVPNIHKNLLSVAQFTHDNSVSITFYPSGFLICDLH 93 LPI H+G ++LS+ + FQ+ + L VP I+KNL+SV FT N+V + F+P+ FL+ D Sbjct: 334 LPITHSGSLTLSFPNRKFQVEDTLCVPTINKNLISVHHFTKQNNVILEFHPTYFLVKDRR 393 Query: 92 TGSILVQGPM*RWIIP 45 TG IL+QGP + P Sbjct: 394 TGEILLQGPCENGVYP 409