BLASTX nr result

ID: Coptis23_contig00042672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042672
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316217.1| predicted protein [Populus trichocarpa] gi|2...   192   2e-47
emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]   184   5e-45
emb|CBI40843.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_002533644.1| conserved hypothetical protein [Ricinus comm...   182   2e-44
ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like ...   176   2e-42

>ref|XP_002316217.1| predicted protein [Populus trichocarpa] gi|222865257|gb|EEF02388.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  192 bits (489), Expect = 2e-47
 Identities = 89/135 (65%), Positives = 105/135 (77%)
 Frame = +3

Query: 3   FMSQGLVHNQPLLYASPSNDPKSFLGTLPSPVSPKDDKSRGPETEQEKGLRIAWQYRKYF 182
           FMSQGLV NQPLLYASP+ DP+ FLGTLP P S KDDKSR  +TEQEKGLRIAWQY+KYF
Sbjct: 75  FMSQGLVQNQPLLYASPAKDPRGFLGTLPCPSSSKDDKSRNHDTEQEKGLRIAWQYKKYF 134

Query: 183 EENQLDNENNKDAKKEYCNEFDLRKPLKVPSLGAQRIDCFSILESPNLTAFRDRCSTFLA 362
            ENQ + +++KD+ +E+CN+FDLRKPL+      QR+DC SI +SPNL    DRC+TFLA
Sbjct: 135 SENQKNIDDHKDSNQEFCNDFDLRKPLEKHFYSGQRVDCVSIKDSPNLATLHDRCATFLA 194

Query: 363 QVPRNDKGIGCAGRI 407
           Q PRND    C GRI
Sbjct: 195 QFPRNDGSFSCMGRI 209


>emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]
          Length = 363

 Score =  184 bits (468), Expect = 5e-45
 Identities = 88/135 (65%), Positives = 105/135 (77%)
 Frame = +3

Query: 3   FMSQGLVHNQPLLYASPSNDPKSFLGTLPSPVSPKDDKSRGPETEQEKGLRIAWQYRKYF 182
           FMSQGLVHNQPLLYASPS DP++FLGTLPSPV  KDD+S   + EQEKGLRIAWQY+KYF
Sbjct: 75  FMSQGLVHNQPLLYASPSKDPRAFLGTLPSPVLSKDDRSHNRDPEQEKGLRIAWQYKKYF 134

Query: 183 EENQLDNENNKDAKKEYCNEFDLRKPLKVPSLGAQRIDCFSILESPNLTAFRDRCSTFLA 362
            E+Q + ++++D K EYCN+FDLRKPL+   L AQ I C SI + PNL A RD C+ FLA
Sbjct: 135 GEHQPNFDSHRDTKHEYCNDFDLRKPLERXFLTAQNICCLSIQDPPNLAAXRDCCAKFLA 194

Query: 363 QVPRNDKGIGCAGRI 407
           Q  RN+  I CAGR+
Sbjct: 195 QFSRNNSSISCAGRV 209


>emb|CBI40843.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  183 bits (464), Expect = 1e-44
 Identities = 90/137 (65%), Positives = 107/137 (78%), Gaps = 2/137 (1%)
 Frame = +3

Query: 3   FMSQGLVHNQPLLYASPSNDPKSFLGTLPSPVSPKDDKS--RGPETEQEKGLRIAWQYRK 176
           FMSQGLVHNQPLLYASPS DP++FLGTLPSPV  KDD+S  R PE  QEKGLRIAWQY+K
Sbjct: 72  FMSQGLVHNQPLLYASPSKDPRAFLGTLPSPVLSKDDRSHNRDPEQLQEKGLRIAWQYKK 131

Query: 177 YFEENQLDNENNKDAKKEYCNEFDLRKPLKVPSLGAQRIDCFSILESPNLTAFRDRCSTF 356
           YF E++ + ++++D K EYCN+FDLRKPL+   L AQ I C SI + PNL AFRD C+ F
Sbjct: 132 YFGEHRPNFDSHRDTKHEYCNDFDLRKPLERYFLTAQNICCLSIQDPPNLAAFRDCCAKF 191

Query: 357 LAQVPRNDKGIGCAGRI 407
           LAQ  RN+  I CAGR+
Sbjct: 192 LAQFSRNNSSISCAGRV 208


>ref|XP_002533644.1| conserved hypothetical protein [Ricinus communis]
           gi|223526457|gb|EEF28732.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 363

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/135 (62%), Positives = 103/135 (76%)
 Frame = +3

Query: 3   FMSQGLVHNQPLLYASPSNDPKSFLGTLPSPVSPKDDKSRGPETEQEKGLRIAWQYRKYF 182
           FMSQGL+ NQPLLY+SPS +P+ FLGTLPSP S KDDK R    E+EKGLRIAWQY+KYF
Sbjct: 75  FMSQGLIQNQPLLYSSPSKEPRVFLGTLPSPSSSKDDKLRKHHPEEEKGLRIAWQYKKYF 134

Query: 183 EENQLDNENNKDAKKEYCNEFDLRKPLKVPSLGAQRIDCFSILESPNLTAFRDRCSTFLA 362
            ENQ   + ++D+K+E+CN+FDLRKPL+      QR+DC S+ +SPNL   +DRCS FLA
Sbjct: 135 GENQQTFDGHRDSKQEFCNDFDLRKPLERHFFSGQRVDCVSVNDSPNLATLQDRCSAFLA 194

Query: 363 QVPRNDKGIGCAGRI 407
           Q PRND GI   GRI
Sbjct: 195 QFPRNDGGISSIGRI 209


>ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like [Vitis vinifera]
          Length = 361

 Score =  176 bits (446), Expect = 2e-42
 Identities = 86/135 (63%), Positives = 104/135 (77%)
 Frame = +3

Query: 3   FMSQGLVHNQPLLYASPSNDPKSFLGTLPSPVSPKDDKSRGPETEQEKGLRIAWQYRKYF 182
           FMSQGLVHNQPLLYASPS DP++FLGTLPSPV  KDD+S   + EQ  GLRIAWQY+KYF
Sbjct: 75  FMSQGLVHNQPLLYASPSKDPRAFLGTLPSPVLSKDDRSHNRDPEQ--GLRIAWQYKKYF 132

Query: 183 EENQLDNENNKDAKKEYCNEFDLRKPLKVPSLGAQRIDCFSILESPNLTAFRDRCSTFLA 362
            E++ + ++++D K EYCN+FDLRKPL+   L AQ I C SI + PNL AFRD C+ FLA
Sbjct: 133 GEHRPNFDSHRDTKHEYCNDFDLRKPLERYFLTAQNICCLSIQDPPNLAAFRDCCAKFLA 192

Query: 363 QVPRNDKGIGCAGRI 407
           Q  RN+  I CAGR+
Sbjct: 193 QFSRNNSSISCAGRV 207


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