BLASTX nr result

ID: Coptis23_contig00042663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042663
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320586.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
emb|CBI19678.3| unnamed protein product [Vitis vinifera]               62   4e-08
tpg|DAA45952.1| TPA: hypothetical protein ZEAMMB73_129622 [Zea m...    55   4e-06
gb|AFW89927.1| hypothetical protein ZEAMMB73_729893 [Zea mays]         55   4e-06
ref|XP_003516304.1| PREDICTED: uncharacterized protein LOC100815...    55   4e-06

>ref|XP_002320586.1| predicted protein [Populus trichocarpa] gi|222861359|gb|EEE98901.1|
            predicted protein [Populus trichocarpa]
          Length = 1004

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
 Frame = +2

Query: 80   KKSWNDLPQFVPKGILKASHGSLLAPLDGNENSDAGR-SQKAVAFSQRQMQDIESLAVKL 256
            +K  ND   F  KGILK    S   P  G   S     S+ A++FSQ+QM+DIES+A KL
Sbjct: 829  RKPKNDKNGFHHKGILKVPQPSGTVPRFGTGCSSVQSCSESAISFSQKQMRDIESIATKL 888

Query: 257  MEKLKSMKDIVNDSLSVKEYSPTPPKYT 340
             ++L SMKD+V +S   K Y  TP KY+
Sbjct: 889  TKELNSMKDVVQESWHSKVYPATPLKYS 916


>emb|CBI19678.3| unnamed protein product [Vitis vinifera]
          Length = 278

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/83 (46%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = +2

Query: 92  NDLPQFVPKGILKASHGSLLAP-LDGNENSDAGRSQKAVAFSQRQMQDIESLAVKLMEKL 268
           ND+    PKGILK    S   P L     S    SQ A++FSQRQM DIE LA KL  +L
Sbjct: 103 NDMKGSHPKGILKVPQLSRGLPHLSNTCTSSQSYSQSAISFSQRQMHDIECLAAKLTREL 162

Query: 269 KSMKDIVNDSLSVKEYSPTPPKY 337
           KSMKDIV +++   E  P+  +Y
Sbjct: 163 KSMKDIVEETMH-SEVCPSSSRY 184


>tpg|DAA45952.1| TPA: hypothetical protein ZEAMMB73_129622 [Zea mays]
          Length = 420

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = +2

Query: 191 SQKAVAFSQRQMQDIESLAVKLMEKLKSMKDIVNDSLSVKEYSPTP 328
           ++KAV FSQRQM DIE++A KL+  LK MK IV++SLS + YS  P
Sbjct: 366 TEKAVEFSQRQMHDIENIAAKLIRSLKHMKSIVDESLSTEAYSLLP 411


>gb|AFW89927.1| hypothetical protein ZEAMMB73_729893 [Zea mays]
          Length = 842

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = +2

Query: 191 SQKAVAFSQRQMQDIESLAVKLMEKLKSMKDIVNDSLSVKEYSPTP 328
           ++KAV FSQRQM DIE++A KL+  LK MK IV++SLS + YS  P
Sbjct: 707 TEKAVEFSQRQMHDIENIAAKLIRSLKHMKSIVDESLSTEAYSLLP 752


>ref|XP_003516304.1| PREDICTED: uncharacterized protein LOC100815294 [Glycine max]
          Length = 869

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 32/63 (50%), Positives = 43/63 (68%)
 Frame = +2

Query: 113 PKGILKASHGSLLAPLDGNENSDAGRSQKAVAFSQRQMQDIESLAVKLMEKLKSMKDIVN 292
           P+GI K +H S  A   G  NS    S+ A+AF+Q+QM D E LA++L ++LKSMKDIV+
Sbjct: 708 PRGISKNAHSSRQATRIGC-NSVQSCSKSAIAFTQQQMHDAECLAMRLTKELKSMKDIVD 766

Query: 293 DSL 301
           D L
Sbjct: 767 DML 769


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