BLASTX nr result

ID: Coptis23_contig00042652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042652
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887771.1| hypothetical protein ARALYDRAFT_477087 [Arab...    69   5e-10
ref|XP_002264362.2| PREDICTED: TEL2-interacting protein 1 homolo...    61   9e-09
emb|CBI24199.3| unnamed protein product [Vitis vinifera]               61   9e-09
gb|AAC17063.1| YUP8H12R.20 [Arabidopsis thaliana]                      61   8e-08
gb|AAO42297.1| unknown protein [Arabidopsis thaliana]                  61   8e-08

>ref|XP_002887771.1| hypothetical protein ARALYDRAFT_477087 [Arabidopsis lyrata subsp.
            lyrata] gi|297333612|gb|EFH64030.1| hypothetical protein
            ARALYDRAFT_477087 [Arabidopsis lyrata subsp. lyrata]
          Length = 1273

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/82 (52%), Positives = 52/82 (63%)
 Frame = -1

Query: 248  SRIKRSASPLDY*RLY*RKSLVLR*MGITCSTVVDLHDDSANALSGLVSIYPDLISLLLA 69
            SR KRSAS LD       K +    +GI CS+V  L + + NAL GL  I PDLI +LLA
Sbjct: 1143 SRDKRSASALDAVL----KKVAGLVVGIACSSVTGLRESALNALRGLACIDPDLIWILLA 1198

Query: 68   DVNYSLRKKDVHLPPSIGL*EI 3
            DV YSL+KKD+ LPPS G  +I
Sbjct: 1199 DVYYSLKKKDLPLPPSPGFPDI 1220


>ref|XP_002264362.2| PREDICTED: TEL2-interacting protein 1 homolog [Vitis vinifera]
          Length = 1390

 Score = 60.8 bits (146), Expect(2) = 9e-09
 Identities = 33/57 (57%), Positives = 40/57 (70%)
 Frame = -1

Query: 173  MGITCSTVVDLHDDSANALSGLVSIYPDLISLLLADVNYSLRKKDVHLPPSIGL*EI 3
            +GI CS+V  L D + NAL+GL SI PDLI LLLADV Y+ RKK +  PP+  L EI
Sbjct: 1284 VGIACSSVSGLRDAALNALTGLSSIDPDLIWLLLADVYYTFRKKHIPSPPTSDLPEI 1340



 Score = 23.5 bits (49), Expect(2) = 9e-09
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 225  SIRLLEAVLKKVSGIEI 175
            S   LEAVLKKVSG+ +
Sbjct: 1268 SASALEAVLKKVSGLVV 1284


>emb|CBI24199.3| unnamed protein product [Vitis vinifera]
          Length = 1386

 Score = 60.8 bits (146), Expect(2) = 9e-09
 Identities = 33/57 (57%), Positives = 40/57 (70%)
 Frame = -1

Query: 173  MGITCSTVVDLHDDSANALSGLVSIYPDLISLLLADVNYSLRKKDVHLPPSIGL*EI 3
            +GI CS+V  L D + NAL+GL SI PDLI LLLADV Y+ RKK +  PP+  L EI
Sbjct: 1280 VGIACSSVSGLRDAALNALTGLSSIDPDLIWLLLADVYYTFRKKHIPSPPTSDLPEI 1336



 Score = 23.5 bits (49), Expect(2) = 9e-09
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 225  SIRLLEAVLKKVSGIEI 175
            S   LEAVLKKVSG+ +
Sbjct: 1264 SASALEAVLKKVSGLVV 1280


>gb|AAC17063.1| YUP8H12R.20 [Arabidopsis thaliana]
          Length = 1325

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 40/76 (52%), Positives = 48/76 (63%)
 Frame = -1

Query: 248  SRIKRSASPLDY*RLY*RKSLVLR*MGITCSTVVDLHDDSANALSGLVSIYPDLISLLLA 69
            SR KRSAS LD       K +    +GI  S+V  L + + NAL GL  I PDLI +LLA
Sbjct: 1032 SRGKRSASALDAVL----KKVAGLVVGIAYSSVTGLREAALNALRGLACIDPDLIWILLA 1087

Query: 68   DVNYSLRKKDVHLPPS 21
            DV YSL+KKD+ LPPS
Sbjct: 1088 DVYYSLKKKDLPLPPS 1103


>gb|AAO42297.1| unknown protein [Arabidopsis thaliana]
          Length = 1093

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 40/76 (52%), Positives = 48/76 (63%)
 Frame = -1

Query: 248  SRIKRSASPLDY*RLY*RKSLVLR*MGITCSTVVDLHDDSANALSGLVSIYPDLISLLLA 69
            SR KRSAS LD       K +    +GI  S+V  L + + NAL GL  I PDLI +LLA
Sbjct: 963  SRGKRSASALDAVL----KKVAGLVVGIAYSSVTGLREAALNALRGLACIDPDLIWILLA 1018

Query: 68   DVNYSLRKKDVHLPPS 21
            DV YSL+KKD+ LPPS
Sbjct: 1019 DVYYSLKKKDLPLPPS 1034


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