BLASTX nr result
ID: Coptis23_contig00042652
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00042652 (392 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002887771.1| hypothetical protein ARALYDRAFT_477087 [Arab... 69 5e-10 ref|XP_002264362.2| PREDICTED: TEL2-interacting protein 1 homolo... 61 9e-09 emb|CBI24199.3| unnamed protein product [Vitis vinifera] 61 9e-09 gb|AAC17063.1| YUP8H12R.20 [Arabidopsis thaliana] 61 8e-08 gb|AAO42297.1| unknown protein [Arabidopsis thaliana] 61 8e-08 >ref|XP_002887771.1| hypothetical protein ARALYDRAFT_477087 [Arabidopsis lyrata subsp. lyrata] gi|297333612|gb|EFH64030.1| hypothetical protein ARALYDRAFT_477087 [Arabidopsis lyrata subsp. lyrata] Length = 1273 Score = 68.6 bits (166), Expect = 5e-10 Identities = 43/82 (52%), Positives = 52/82 (63%) Frame = -1 Query: 248 SRIKRSASPLDY*RLY*RKSLVLR*MGITCSTVVDLHDDSANALSGLVSIYPDLISLLLA 69 SR KRSAS LD K + +GI CS+V L + + NAL GL I PDLI +LLA Sbjct: 1143 SRDKRSASALDAVL----KKVAGLVVGIACSSVTGLRESALNALRGLACIDPDLIWILLA 1198 Query: 68 DVNYSLRKKDVHLPPSIGL*EI 3 DV YSL+KKD+ LPPS G +I Sbjct: 1199 DVYYSLKKKDLPLPPSPGFPDI 1220 >ref|XP_002264362.2| PREDICTED: TEL2-interacting protein 1 homolog [Vitis vinifera] Length = 1390 Score = 60.8 bits (146), Expect(2) = 9e-09 Identities = 33/57 (57%), Positives = 40/57 (70%) Frame = -1 Query: 173 MGITCSTVVDLHDDSANALSGLVSIYPDLISLLLADVNYSLRKKDVHLPPSIGL*EI 3 +GI CS+V L D + NAL+GL SI PDLI LLLADV Y+ RKK + PP+ L EI Sbjct: 1284 VGIACSSVSGLRDAALNALTGLSSIDPDLIWLLLADVYYTFRKKHIPSPPTSDLPEI 1340 Score = 23.5 bits (49), Expect(2) = 9e-09 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = -3 Query: 225 SIRLLEAVLKKVSGIEI 175 S LEAVLKKVSG+ + Sbjct: 1268 SASALEAVLKKVSGLVV 1284 >emb|CBI24199.3| unnamed protein product [Vitis vinifera] Length = 1386 Score = 60.8 bits (146), Expect(2) = 9e-09 Identities = 33/57 (57%), Positives = 40/57 (70%) Frame = -1 Query: 173 MGITCSTVVDLHDDSANALSGLVSIYPDLISLLLADVNYSLRKKDVHLPPSIGL*EI 3 +GI CS+V L D + NAL+GL SI PDLI LLLADV Y+ RKK + PP+ L EI Sbjct: 1280 VGIACSSVSGLRDAALNALTGLSSIDPDLIWLLLADVYYTFRKKHIPSPPTSDLPEI 1336 Score = 23.5 bits (49), Expect(2) = 9e-09 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = -3 Query: 225 SIRLLEAVLKKVSGIEI 175 S LEAVLKKVSG+ + Sbjct: 1264 SASALEAVLKKVSGLVV 1280 >gb|AAC17063.1| YUP8H12R.20 [Arabidopsis thaliana] Length = 1325 Score = 61.2 bits (147), Expect = 8e-08 Identities = 40/76 (52%), Positives = 48/76 (63%) Frame = -1 Query: 248 SRIKRSASPLDY*RLY*RKSLVLR*MGITCSTVVDLHDDSANALSGLVSIYPDLISLLLA 69 SR KRSAS LD K + +GI S+V L + + NAL GL I PDLI +LLA Sbjct: 1032 SRGKRSASALDAVL----KKVAGLVVGIAYSSVTGLREAALNALRGLACIDPDLIWILLA 1087 Query: 68 DVNYSLRKKDVHLPPS 21 DV YSL+KKD+ LPPS Sbjct: 1088 DVYYSLKKKDLPLPPS 1103 >gb|AAO42297.1| unknown protein [Arabidopsis thaliana] Length = 1093 Score = 61.2 bits (147), Expect = 8e-08 Identities = 40/76 (52%), Positives = 48/76 (63%) Frame = -1 Query: 248 SRIKRSASPLDY*RLY*RKSLVLR*MGITCSTVVDLHDDSANALSGLVSIYPDLISLLLA 69 SR KRSAS LD K + +GI S+V L + + NAL GL I PDLI +LLA Sbjct: 963 SRGKRSASALDAVL----KKVAGLVVGIAYSSVTGLREAALNALRGLACIDPDLIWILLA 1018 Query: 68 DVNYSLRKKDVHLPPS 21 DV YSL+KKD+ LPPS Sbjct: 1019 DVYYSLKKKDLPLPPS 1034