BLASTX nr result

ID: Coptis23_contig00042633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042633
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41130.1| unknown [Lotus japonicus]                               70   1e-10
ref|XP_002306923.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002510524.1| conserved hypothetical protein [Ricinus comm...    65   4e-09
emb|CAN75365.1| hypothetical protein VITISV_030645 [Vitis vinifera]    65   7e-09
ref|XP_002890361.1| hypothetical protein ARALYDRAFT_472221 [Arab...    60   2e-07

>gb|AFK41130.1| unknown [Lotus japonicus]
          Length = 84

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/72 (52%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +1

Query: 22  MKLFDRFRKILMRFVFSLPSARSVPRH-RSTHADRPEPPKTXXXXXXXXXXXXXXEAIAD 198
           MKLF+R RKILM  +F +PS RS+       H DR EPPKT              EAIAD
Sbjct: 1   MKLFNRLRKILMSLIFLVPSRRSMTDSTHKNHPDRFEPPKTSSCSSHYSFYSHYNEAIAD 60

Query: 199 CIEFFNKSSQDG 234
           CIEFFN+S+QDG
Sbjct: 61  CIEFFNESAQDG 72


>ref|XP_002306923.1| predicted protein [Populus trichocarpa] gi|222856372|gb|EEE93919.1|
           predicted protein [Populus trichocarpa]
          Length = 80

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/71 (53%), Positives = 46/71 (64%)
 Frame = +1

Query: 22  MKLFDRFRKILMRFVFSLPSARSVPRHRSTHADRPEPPKTXXXXXXXXXXXXXXEAIADC 201
           MKLF+RFRKILMR VFS P+  S+   + +  +R +PPKT              EAIADC
Sbjct: 1   MKLFNRFRKILMRLVFSSPTTSSMASKQRS-CERFDPPKTSCSSYYSSNSHYS-EAIADC 58

Query: 202 IEFFNKSSQDG 234
           IEFFNKSSQ+G
Sbjct: 59  IEFFNKSSQEG 69


>ref|XP_002510524.1| conserved hypothetical protein [Ricinus communis]
           gi|223551225|gb|EEF52711.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 129

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
 Frame = +1

Query: 1   SSTTLSSMKLFDRFRKILMRFVFSLPSARSVPRHRST------HADRPEPPKTXXXXXXX 162
           S    S+MKLF+RFRKILMR +FS+P++     H S+        D+ +PPKT       
Sbjct: 36  SKLNFSAMKLFNRFRKILMRLLFSIPNSHHHHHHGSSGTSKQRSCDKFDPPKT-SCSSYY 94

Query: 163 XXXXXXXEAIADCIEFFNKSSQDG 234
                  EAIADCIEF N+SSQ+G
Sbjct: 95  SSQSHYSEAIADCIEFLNRSSQEG 118


>emb|CAN75365.1| hypothetical protein VITISV_030645 [Vitis vinifera]
          Length = 511

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 40/79 (50%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
 Frame = +1

Query: 1   SSTTLSSMKLFDRFRKILMRFVFSLPS------ARSVPRHRSTHADRPEPPKTXXXXXXX 162
           SS   S+MKLF RFRKILMRF FS PS        S    R    D+P+PPKT       
Sbjct: 421 SSLNFSAMKLFHRFRKILMRFFFSFPSRAASSATTSSALSRQKAYDKPDPPKT-SCSSYY 479

Query: 163 XXXXXXXEAIADCIEFFNK 219
                  EAIADCIEFFNK
Sbjct: 480 SSNSHYTEAIADCIEFFNK 498


>ref|XP_002890361.1| hypothetical protein ARALYDRAFT_472221 [Arabidopsis lyrata subsp.
           lyrata] gi|297336203|gb|EFH66620.1| hypothetical protein
           ARALYDRAFT_472221 [Arabidopsis lyrata subsp. lyrata]
          Length = 135

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
 Frame = +1

Query: 16  SSMKLFDRFRKILMRFVFSLPSARSVPRHRST-----HADRPEPPKTXXXXXXXXXXXXX 180
           SSMKLF +FRKI MR +F+ PS+ +  R   T       +R E PK              
Sbjct: 45  SSMKLFSKFRKIFMRIIFTFPSSSATVRPHKTADSGNGCERLETPKISCSNSYYSSHSHY 104

Query: 181 XEAIADCIEFFNKSSQD 231
            EAI+DCI+FFNKS Q+
Sbjct: 105 SEAISDCIDFFNKSQQE 121


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