BLASTX nr result
ID: Coptis23_contig00042633
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00042633 (243 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK41130.1| unknown [Lotus japonicus] 70 1e-10 ref|XP_002306923.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 ref|XP_002510524.1| conserved hypothetical protein [Ricinus comm... 65 4e-09 emb|CAN75365.1| hypothetical protein VITISV_030645 [Vitis vinifera] 65 7e-09 ref|XP_002890361.1| hypothetical protein ARALYDRAFT_472221 [Arab... 60 2e-07 >gb|AFK41130.1| unknown [Lotus japonicus] Length = 84 Score = 70.5 bits (171), Expect = 1e-10 Identities = 38/72 (52%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Frame = +1 Query: 22 MKLFDRFRKILMRFVFSLPSARSVPRH-RSTHADRPEPPKTXXXXXXXXXXXXXXEAIAD 198 MKLF+R RKILM +F +PS RS+ H DR EPPKT EAIAD Sbjct: 1 MKLFNRLRKILMSLIFLVPSRRSMTDSTHKNHPDRFEPPKTSSCSSHYSFYSHYNEAIAD 60 Query: 199 CIEFFNKSSQDG 234 CIEFFN+S+QDG Sbjct: 61 CIEFFNESAQDG 72 >ref|XP_002306923.1| predicted protein [Populus trichocarpa] gi|222856372|gb|EEE93919.1| predicted protein [Populus trichocarpa] Length = 80 Score = 65.9 bits (159), Expect = 3e-09 Identities = 38/71 (53%), Positives = 46/71 (64%) Frame = +1 Query: 22 MKLFDRFRKILMRFVFSLPSARSVPRHRSTHADRPEPPKTXXXXXXXXXXXXXXEAIADC 201 MKLF+RFRKILMR VFS P+ S+ + + +R +PPKT EAIADC Sbjct: 1 MKLFNRFRKILMRLVFSSPTTSSMASKQRS-CERFDPPKTSCSSYYSSNSHYS-EAIADC 58 Query: 202 IEFFNKSSQDG 234 IEFFNKSSQ+G Sbjct: 59 IEFFNKSSQEG 69 >ref|XP_002510524.1| conserved hypothetical protein [Ricinus communis] gi|223551225|gb|EEF52711.1| conserved hypothetical protein [Ricinus communis] Length = 129 Score = 65.5 bits (158), Expect = 4e-09 Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 6/84 (7%) Frame = +1 Query: 1 SSTTLSSMKLFDRFRKILMRFVFSLPSARSVPRHRST------HADRPEPPKTXXXXXXX 162 S S+MKLF+RFRKILMR +FS+P++ H S+ D+ +PPKT Sbjct: 36 SKLNFSAMKLFNRFRKILMRLLFSIPNSHHHHHHGSSGTSKQRSCDKFDPPKT-SCSSYY 94 Query: 163 XXXXXXXEAIADCIEFFNKSSQDG 234 EAIADCIEF N+SSQ+G Sbjct: 95 SSQSHYSEAIADCIEFLNRSSQEG 118 >emb|CAN75365.1| hypothetical protein VITISV_030645 [Vitis vinifera] Length = 511 Score = 64.7 bits (156), Expect = 7e-09 Identities = 40/79 (50%), Positives = 43/79 (54%), Gaps = 6/79 (7%) Frame = +1 Query: 1 SSTTLSSMKLFDRFRKILMRFVFSLPS------ARSVPRHRSTHADRPEPPKTXXXXXXX 162 SS S+MKLF RFRKILMRF FS PS S R D+P+PPKT Sbjct: 421 SSLNFSAMKLFHRFRKILMRFFFSFPSRAASSATTSSALSRQKAYDKPDPPKT-SCSSYY 479 Query: 163 XXXXXXXEAIADCIEFFNK 219 EAIADCIEFFNK Sbjct: 480 SSNSHYTEAIADCIEFFNK 498 >ref|XP_002890361.1| hypothetical protein ARALYDRAFT_472221 [Arabidopsis lyrata subsp. lyrata] gi|297336203|gb|EFH66620.1| hypothetical protein ARALYDRAFT_472221 [Arabidopsis lyrata subsp. lyrata] Length = 135 Score = 60.1 bits (144), Expect = 2e-07 Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 5/77 (6%) Frame = +1 Query: 16 SSMKLFDRFRKILMRFVFSLPSARSVPRHRST-----HADRPEPPKTXXXXXXXXXXXXX 180 SSMKLF +FRKI MR +F+ PS+ + R T +R E PK Sbjct: 45 SSMKLFSKFRKIFMRIIFTFPSSSATVRPHKTADSGNGCERLETPKISCSNSYYSSHSHY 104 Query: 181 XEAIADCIEFFNKSSQD 231 EAI+DCI+FFNKS Q+ Sbjct: 105 SEAISDCIDFFNKSQQE 121