BLASTX nr result

ID: Coptis23_contig00042588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042588
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]    91   1e-16
ref|XP_003528127.1| PREDICTED: uncharacterized protein LOC100812...    76   3e-12
ref|XP_003522412.1| PREDICTED: uncharacterized protein LOC100819...    73   3e-11
ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10

>emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]
          Length = 1057

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/98 (50%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
 Frame = -1

Query: 291 LESIGIDESSYNTSLFINENIDVMDYDDCRCGINCCWLSTRRSREPNLPSNREDEP-LLS 115
           L  + ++ SS +TSL  NE  + +D++D  CGI CCW  T R RE NL S+ ED P LL 
Sbjct: 307 LSDVLLEGSSRSTSLLANEESNAIDHNDRGCGIRCCWSRTPRFRESNLLSDVEDNPLLLG 366

Query: 114 RGGETGLSGHERSCTYAKNEIAPYSDCPRSLSHKFQPE 1
             GET LSG + S     NEI PYS+ PRSLS KF+P+
Sbjct: 367 EVGETILSGQKWSWKCFNNEITPYSESPRSLSQKFRPK 404


>ref|XP_003528127.1| PREDICTED: uncharacterized protein LOC100812040 [Glycine max]
          Length = 979

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
 Frame = -1

Query: 267 SSYNTSLFINENIDVMDYDDCRCGINCCWLSTRRSREPNLPSNREDEPLLS-RGGETGLS 91
           S Y+  + IN+++DV+D +D  CGI+CCW  + R RE NL    ED PL+S R  ET L 
Sbjct: 219 SPYSAKVGINQDVDVLDNNDDGCGISCCWSKSPRFRESNLYGEIEDRPLISHRVDETDLD 278

Query: 90  GHERSCTYAKNEIAPYSDCPRSLSHKFQPE 1
            H RS  +    I+P  + PRSLS KF+P+
Sbjct: 279 AH-RSMRHNGGGISPTLETPRSLSMKFRPK 307


>ref|XP_003522412.1| PREDICTED: uncharacterized protein LOC100819111 [Glycine max]
          Length = 952

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = -1

Query: 267 SSYNTSLFINENIDVMDYDDCRCGINCCWLSTRRSREPNLPSNREDEPLLS-RGGETGLS 91
           S Y  S+ IN+++DV+D +D  CGI+CCW  + R RE NL    ED PL++ R  ET L 
Sbjct: 218 SPYCASVGINQDVDVLDNNDNGCGISCCWSKSPRFRESNLYGEIEDRPLITHRVDETDLH 277

Query: 90  GHERSCTYAKNEIAPYSDCPRSLSHKFQPE 1
            H          I+P  + PRSLS KF+P+
Sbjct: 278 AHRSMRHNGGGGISPTLETPRSLSMKFRPK 307


>ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|222858771|gb|EEE96318.1|
           predicted protein [Populus trichocarpa]
          Length = 965

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/89 (46%), Positives = 51/89 (57%)
 Frame = -1

Query: 267 SSYNTSLFINENIDVMDYDDCRCGINCCWLSTRRSREPNLPSNREDEPLLSRGGETGLSG 88
           SS++TSLF NE  D M  +D  CGI+CCW  T R R+ N  S+ E  PLLSR       G
Sbjct: 220 SSHSTSLFANEETDFMVQNDRGCGISCCWTKTPRLRDSNPYSDAEGNPLLSRDVAETTRG 279

Query: 87  HERSCTYAKNEIAPYSDCPRSLSHKFQPE 1
            +RS  +  NE       PRSLS KF+P+
Sbjct: 280 -KRSWKHTTNE------TPRSLSQKFRPK 301


>ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|222868653|gb|EEF05784.1|
           predicted protein [Populus trichocarpa]
          Length = 907

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 43/90 (47%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
 Frame = -1

Query: 267 SSYNTSLFINENIDVMDYDDCRCGINCCWLSTRRSREPNLPSNREDEPLLSRG-GETGLS 91
           SS  TSLF N+  D M   D  CGI+CCW  T R R+ N  S+ E  PLLSR   ET   
Sbjct: 176 SSQGTSLFANKEADFMVQKDHGCGISCCWTRTPRLRDSNPYSDAEGNPLLSRDVAETSPC 235

Query: 90  GHERSCTYAKNEIAPYSDCPRSLSHKFQPE 1
           G +RS  +A NE       PRSLS KF+P+
Sbjct: 236 G-KRSWKHATNE------TPRSLSQKFRPK 258


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