BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042585
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
emb|CBI22243.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japo...   111   5e-23

>ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Brachypodium distachyon]
          Length = 571

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/87 (64%), Positives = 68/87 (78%)
 Frame = -3

Query: 263 EKDVRTWSVMIGGLAVHGLAKEALGFLSDMKRDGIDPDSVTFTHVLRACSHAGMVAEGLR 84
           +KDVRTWSVMI GLAV+GL ++AL   ++MK  G+DPDS+T T VL ACSHAGMV EG  
Sbjct: 262 DKDVRTWSVMIAGLAVNGLPRDALKLFAEMKNIGVDPDSITMTAVLSACSHAGMVDEGKM 321

Query: 83  FFDIMSEMYNVEPTIEHYGCMVDLLGR 3
           F   M   Y+++PTIEHYGC+VDLLGR
Sbjct: 322 FLHCMPIEYHLQPTIEHYGCVVDLLGR 348


>ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 516

 Score =  114 bits (284), Expect = 1e-23
 Identities = 48/90 (53%), Positives = 70/90 (77%)
 Frame = -3

Query: 272 KIREKDVRTWSVMIGGLAVHGLAKEALGFLSDMKRDGIDPDSVTFTHVLRACSHAGMVAE 93
           K+ +K V  W+ +IGGLA+HG  +EAL + + M++ GI+P+S+TFT +L ACSHAG+  E
Sbjct: 302 KLEKKCVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEE 361

Query: 92  GLRFFDIMSEMYNVEPTIEHYGCMVDLLGR 3
           G   F+ MS +YN++P++EHYGCMVDL+GR
Sbjct: 362 GKSLFESMSSVYNIKPSMEHYGCMVDLMGR 391


>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  113 bits (282), Expect = 2e-23
 Identities = 50/89 (56%), Positives = 68/89 (76%)
 Frame = -3

Query: 269 IREKDVRTWSVMIGGLAVHGLAKEALGFLSDMKRDGIDPDSVTFTHVLRACSHAGMVAEG 90
           +REKDV TW+ ++GGLA HG A++++   ++M++  I PD +TF  VL ACSHAG V EG
Sbjct: 303 MREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEG 362

Query: 89  LRFFDIMSEMYNVEPTIEHYGCMVDLLGR 3
            ++FD+M + YN+EP I HYGCMVDLLGR
Sbjct: 363 RQYFDLMRDEYNIEPNIRHYGCMVDLLGR 391


>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Vitis vinifera]
          Length = 550

 Score =  113 bits (282), Expect = 2e-23
 Identities = 50/89 (56%), Positives = 68/89 (76%)
 Frame = -3

Query: 269 IREKDVRTWSVMIGGLAVHGLAKEALGFLSDMKRDGIDPDSVTFTHVLRACSHAGMVAEG 90
           +REKDV TW+ ++GGLA HG A++++   ++M++  I PD +TF  VL ACSHAG V EG
Sbjct: 338 MREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEG 397

Query: 89  LRFFDIMSEMYNVEPTIEHYGCMVDLLGR 3
            ++FD+M + YN+EP I HYGCMVDLLGR
Sbjct: 398 RQYFDLMRDEYNIEPNIRHYGCMVDLLGR 426


>gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
          Length = 492

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/90 (56%), Positives = 68/90 (75%)
 Frame = -3

Query: 272 KIREKDVRTWSVMIGGLAVHGLAKEALGFLSDMKRDGIDPDSVTFTHVLRACSHAGMVAE 93
           ++ EKDV+TWS MI GLA HGL  E+L   S M  +G+ P+ VTF  VL AC+H G+V+E
Sbjct: 180 RMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSE 239

Query: 92  GLRFFDIMSEMYNVEPTIEHYGCMVDLLGR 3
           G ++F  M+E++ +EPT+EHYGCMVDLLGR
Sbjct: 240 GKKYFRSMNEVHGIEPTVEHYGCMVDLLGR 269