BLASTX nr result

ID: Coptis23_contig00042581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042581
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   218   3e-55
emb|CBI27088.3| unnamed protein product [Vitis vinifera]              218   3e-55
emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera]   218   3e-55
ref|XP_002314895.1| white-brown-complex ABC transporter family [...   215   3e-54
ref|XP_002524381.1| ATP-binding cassette transporter, putative [...   213   1e-53

>ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
           21-like [Vitis vinifera]
          Length = 677

 Score =  218 bits (556), Expect = 3e-55
 Identities = 106/124 (85%), Positives = 117/124 (94%)
 Frame = +2

Query: 2   AGRLPGKVSGTITYNGLPFSGYIKRKTGFVTQDDMFYPHLTVFETLTYAALLRLPKQLGR 181
           AGRLPGKVSG ITYNG PFS  +KRKTGFVTQDD+ YPHLTV ETLTYAALLRLPK+L R
Sbjct: 130 AGRLPGKVSGNITYNGQPFSSSMKRKTGFVTQDDVLYPHLTVLETLTYAALLRLPKKLTR 189

Query: 182 QEKIEQAEVVIMELGLTKCRNSIVGGPLLRGVSGGERKRVSIGQEMLVNPSLLLLDEPTS 361
           +EKIEQAE++I+ELGLT+CRNS++GGPLLRG+SGGERKRVSIGQEMLVNPSLLLLDEPTS
Sbjct: 190 EEKIEQAELIIVELGLTRCRNSVIGGPLLRGISGGERKRVSIGQEMLVNPSLLLLDEPTS 249

Query: 362 GLDS 373
           GLDS
Sbjct: 250 GLDS 253


>emb|CBI27088.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  218 bits (556), Expect = 3e-55
 Identities = 106/124 (85%), Positives = 117/124 (94%)
 Frame = +2

Query: 2   AGRLPGKVSGTITYNGLPFSGYIKRKTGFVTQDDMFYPHLTVFETLTYAALLRLPKQLGR 181
           AGRLPGKVSG ITYNG PFS  +KRKTGFVTQDD+ YPHLTV ETLTYAALLRLPK+L R
Sbjct: 130 AGRLPGKVSGNITYNGQPFSSSMKRKTGFVTQDDVLYPHLTVLETLTYAALLRLPKKLTR 189

Query: 182 QEKIEQAEVVIMELGLTKCRNSIVGGPLLRGVSGGERKRVSIGQEMLVNPSLLLLDEPTS 361
           +EKIEQAE++I+ELGLT+CRNS++GGPLLRG+SGGERKRVSIGQEMLVNPSLLLLDEPTS
Sbjct: 190 EEKIEQAELIIVELGLTRCRNSVIGGPLLRGISGGERKRVSIGQEMLVNPSLLLLDEPTS 249

Query: 362 GLDS 373
           GLDS
Sbjct: 250 GLDS 253


>emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera]
          Length = 696

 Score =  218 bits (556), Expect = 3e-55
 Identities = 106/124 (85%), Positives = 117/124 (94%)
 Frame = +2

Query: 2   AGRLPGKVSGTITYNGLPFSGYIKRKTGFVTQDDMFYPHLTVFETLTYAALLRLPKQLGR 181
           AGRLPGKVSG ITYNG PFS  +KRKTGFVTQDD+ YPHLTV ETLTYAALLRLPK+L R
Sbjct: 150 AGRLPGKVSGNITYNGQPFSSSMKRKTGFVTQDDVLYPHLTVLETLTYAALLRLPKKLTR 209

Query: 182 QEKIEQAEVVIMELGLTKCRNSIVGGPLLRGVSGGERKRVSIGQEMLVNPSLLLLDEPTS 361
           +EKIEQAE++I+ELGLT+CRNS++GGPLLRG+SGGERKRVSIGQEMLVNPSLLLLDEPTS
Sbjct: 210 EEKIEQAELIIVELGLTRCRNSVIGGPLLRGISGGERKRVSIGQEMLVNPSLLLLDEPTS 269

Query: 362 GLDS 373
           GLDS
Sbjct: 270 GLDS 273


>ref|XP_002314895.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222863935|gb|EEF01066.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 683

 Score =  215 bits (547), Expect = 3e-54
 Identities = 106/124 (85%), Positives = 115/124 (92%)
 Frame = +2

Query: 2   AGRLPGKVSGTITYNGLPFSGYIKRKTGFVTQDDMFYPHLTVFETLTYAALLRLPKQLGR 181
           AGRLPGKVSGTITYNG  FS  +KR+TGFVTQDD+ YPHLTV ETLTYAALLRLPK+L R
Sbjct: 139 AGRLPGKVSGTITYNGQAFSSSMKRRTGFVTQDDVLYPHLTVLETLTYAALLRLPKKLTR 198

Query: 182 QEKIEQAEVVIMELGLTKCRNSIVGGPLLRGVSGGERKRVSIGQEMLVNPSLLLLDEPTS 361
           QEKIEQAE++IMELGLT+CRNS+VGGPL RG+SGGERKRVSIG EMLVNPSLLLLDEPTS
Sbjct: 199 QEKIEQAELIIMELGLTRCRNSVVGGPLFRGISGGERKRVSIGLEMLVNPSLLLLDEPTS 258

Query: 362 GLDS 373
           GLDS
Sbjct: 259 GLDS 262


>ref|XP_002524381.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223536342|gb|EEF37992.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 709

 Score =  213 bits (543), Expect = 1e-53
 Identities = 105/124 (84%), Positives = 115/124 (92%)
 Frame = +2

Query: 2   AGRLPGKVSGTITYNGLPFSGYIKRKTGFVTQDDMFYPHLTVFETLTYAALLRLPKQLGR 181
           +GRLP KVSGTITYNGLP+S  +KR TGFV QDD+ YPHLTV ETLTYAALLRLPK+L +
Sbjct: 162 SGRLPVKVSGTITYNGLPYSSSMKRNTGFVAQDDILYPHLTVIETLTYAALLRLPKKLSK 221

Query: 182 QEKIEQAEVVIMELGLTKCRNSIVGGPLLRGVSGGERKRVSIGQEMLVNPSLLLLDEPTS 361
           QEKIEQAE+VIMELGL +CRNSI+GGPLLRGVSGGERKRVSIGQE+LVNPSLLLLDEPTS
Sbjct: 222 QEKIEQAEMVIMELGLNRCRNSIIGGPLLRGVSGGERKRVSIGQELLVNPSLLLLDEPTS 281

Query: 362 GLDS 373
           GLDS
Sbjct: 282 GLDS 285


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