BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042568
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531552.1| cyclin d, putative [Ricinus communis] gi|223...    96   2e-18
ref|XP_002271184.2| PREDICTED: putative cyclin-D7-1-like [Vitis ...    92   6e-17
gb|AEV41138.1| D7-type cyclin [Populus x canadensis]                   80   1e-13
ref|XP_002309075.1| predicted protein [Populus trichocarpa] gi|1...    79   4e-13
ref|XP_003516287.1| PREDICTED: putative cyclin-D7-1-like [Glycin...    65   7e-09

>ref|XP_002531552.1| cyclin d, putative [Ricinus communis] gi|223528813|gb|EEF30818.1|
           cyclin d, putative [Ricinus communis]
          Length = 349

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 4/106 (3%)
 Frame = +2

Query: 5   DPKFIQFRPSTIAVSALRCSLEELAPSKSDAYLFKLLCLIPQDQKVDINKSHKIMEEQVA 184
           D KF +FRPS  AVSA+ C LEEL PSK+   L  +   + +DQK DI K H I+E+++ 
Sbjct: 224 DCKFAEFRPSIAAVSAIWCGLEELIPSKTSTQLTYITGFLNKDQKDDIVKCHNILEQKLI 283

Query: 185 DPL----YCSSSNCCPYFPSSPVTVMQVQRIDTFNCYIDLSLSMVP 310
           DPL     C +S+ C   PSSPVTV+  +RID ++C++DLSL  +P
Sbjct: 284 DPLNDLAACENSSYC---PSSPVTVLLTERIDVYDCHVDLSLFKMP 326


>ref|XP_002271184.2| PREDICTED: putative cyclin-D7-1-like [Vitis vinifera]
           gi|297740336|emb|CBI30518.3| unnamed protein product
           [Vitis vinifera]
          Length = 338

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/105 (47%), Positives = 70/105 (66%), Gaps = 5/105 (4%)
 Frame = +2

Query: 2   SDPKFIQFRPSTIAVSALRCSLEELAPSKSDAYLFKLLC-LIPQDQKVDINKSHKIMEEQ 178
           SD KF+ FRPS +AVSA+RC  EEL  SKSDA +   L   IP +QK D+ +  KIME +
Sbjct: 215 SDSKFLDFRPSVVAVSAIRCCSEELLSSKSDASVMTYLTDFIPPEQKDDLARCQKIMELR 274

Query: 179 VADPLY----CSSSNCCPYFPSSPVTVMQVQRIDTFNCYIDLSLS 301
           + DPLY    C +S  C   PSSP+TV+ ++  +T +C+++LS+S
Sbjct: 275 MTDPLYKIKVCGNSKYC---PSSPITVLTMKGTNTCDCHVNLSVS 316


>gb|AEV41138.1| D7-type cyclin [Populus x canadensis]
          Length = 356

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 50/105 (47%), Positives = 65/105 (61%), Gaps = 8/105 (7%)
 Frame = +2

Query: 5   DPKFIQFRPSTIAVSALRCSLEELAPSKSDAYLFKLLCLI-PQDQKVD-INKSHKIMEEQ 178
           D   + FRPS  A+SAL CSLEE  PSKSDA+L ++  L+   D K D + K H IME Q
Sbjct: 220 DCSMVGFRPSITAISALWCSLEEFVPSKSDAHLARIKGLVNALDHKDDVVIKCHGIMEAQ 279

Query: 179 VADPLY----CSS--SNCCPYFPSSPVTVMQVQRIDTFNCYIDLS 295
           + +P+Y    C    S CC   PSSPVTV+  +RI  ++C +DLS
Sbjct: 280 LINPVYNLLACGKKHSYCC---PSSPVTVLPTERIGIYDCDVDLS 321


>ref|XP_002309075.1| predicted protein [Populus trichocarpa]
           gi|159025740|emb|CAN88869.1| D7-type cyclin [Populus
           trichocarpa] gi|222855051|gb|EEE92598.1| predicted
           protein [Populus trichocarpa]
          Length = 356

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
 Frame = +2

Query: 5   DPKFIQFRPSTIAVSALRCSLEELAPSKSDAYLFKLLCLI-PQDQKVD-INKSHKIMEEQ 178
           D   + FRPS  A+SAL CSLEE  PSKSDA+L  +  L+   D K D + K H IME Q
Sbjct: 220 DCSMVGFRPSITAISALWCSLEEFVPSKSDAHLAHIKGLLNALDHKDDVVIKCHGIMEAQ 279

Query: 179 VADPLY----CSS--SNCCPYFPSSPVTVMQVQRIDTFNCYIDLS 295
           + +P+Y    C    S CC   PSSPVTV+  +RI  ++C +DLS
Sbjct: 280 LINPVYNLLACGKKHSYCC---PSSPVTVLPTERIGIYDCDVDLS 321


>ref|XP_003516287.1| PREDICTED: putative cyclin-D7-1-like [Glycine max]
          Length = 289

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/82 (41%), Positives = 49/82 (59%)
 Frame = +2

Query: 5   DPKFIQFRPSTIAVSALRCSLEELAPSKSDAYLFKLLCLIPQDQKVDINKSHKIMEEQVA 184
           D K ++FRPS + +SAL C+L++L P  SD Y+  ++ ++ Q QK DI K HK+ME Q +
Sbjct: 207 DQKMMEFRPSVVGMSALWCTLDQLFPPTSDTYIAYIMSILNQSQKDDIIKCHKLMETQTS 266

Query: 185 DPLYCSSSNCCPYFPSSPVTVM 250
                   N   Y P SP TV+
Sbjct: 267 ----MCVENHHYYCPLSPTTVL 284