BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042524
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285679.1| PREDICTED: probable DNA primase large subuni...   137   7e-31
ref|XP_002303780.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
gb|AAG00249.1|AC002130_14 F1N21.14 [Arabidopsis thaliana]             128   4e-28
gb|AAO24587.1| At1g67320 [Arabidopsis thaliana] gi|110736276|dbj...   128   4e-28
ref|NP_564893.2| DNA primase large subunit [Arabidopsis thaliana...   128   4e-28

>ref|XP_002285679.1| PREDICTED: probable DNA primase large subunit [Vitis vinifera]
           gi|297741936|emb|CBI33371.3| unnamed protein product
           [Vitis vinifera]
          Length = 452

 Score =  137 bits (346), Expect = 7e-31
 Identities = 68/78 (87%), Positives = 74/78 (94%)
 Frame = +3

Query: 3   SLVVTQFRSHLSKALVLTNRKWTSTIREQEKDRLTPIVEALSTSYLGPDYSQPKEFSEIS 182
           SLVVTQFRSHLSKALVLTNRKWTSTIREQEK+RLTPIVEALSTSYLGPDYSQP+EF EIS
Sbjct: 205 SLVVTQFRSHLSKALVLTNRKWTSTIREQEKERLTPIVEALSTSYLGPDYSQPREFVEIS 264

Query: 183 VMDINKVTNSSFPL*MQH 236
           + DI++V NSSFPL M+H
Sbjct: 265 IKDIDQVANSSFPLCMRH 282


>ref|XP_002303780.1| predicted protein [Populus trichocarpa] gi|222841212|gb|EEE78759.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/78 (82%), Positives = 70/78 (89%)
 Frame = +3

Query: 3   SLVVTQFRSHLSKALVLTNRKWTSTIREQEKDRLTPIVEALSTSYLGPDYSQPKEFSEIS 182
           SLVVTQFR  LSKALVLTNRKWTSTIREQEKDRLTPIVE L TSYLGPDYSQPKEF+E+S
Sbjct: 208 SLVVTQFRGLLSKALVLTNRKWTSTIREQEKDRLTPIVETLCTSYLGPDYSQPKEFAEVS 267

Query: 183 VMDINKVTNSSFPL*MQH 236
           + DI++V  SSFPL M+H
Sbjct: 268 IKDIDQVAKSSFPLCMRH 285


>gb|AAG00249.1|AC002130_14 F1N21.14 [Arabidopsis thaliana]
          Length = 765

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/78 (79%), Positives = 73/78 (93%)
 Frame = +3

Query: 3   SLVVTQFRSHLSKALVLTNRKWTSTIREQEKDRLTPIVEALSTSYLGPDYSQPKEFSEIS 182
           SLVVTQFRSHLSKAL+LTNRKWT+TIRE+EKDRLTPIVEALSTSYLGPDYSQ  E+++IS
Sbjct: 537 SLVVTQFRSHLSKALILTNRKWTTTIREREKDRLTPIVEALSTSYLGPDYSQSNEYADIS 596

Query: 183 VMDINKVTNSSFPL*MQH 236
           + DI++V+ SSFPL M+H
Sbjct: 597 LKDIDQVSKSSFPLCMRH 614


>gb|AAO24587.1| At1g67320 [Arabidopsis thaliana] gi|110736276|dbj|BAF00108.1|
           hypothetical protein [Arabidopsis thaliana]
          Length = 454

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/78 (79%), Positives = 73/78 (93%)
 Frame = +3

Query: 3   SLVVTQFRSHLSKALVLTNRKWTSTIREQEKDRLTPIVEALSTSYLGPDYSQPKEFSEIS 182
           SLVVTQFRSHLSKAL+LTNRKWT+TIRE+EKDRLTPIVEALSTSYLGPDYSQ  E+++IS
Sbjct: 206 SLVVTQFRSHLSKALILTNRKWTTTIREREKDRLTPIVEALSTSYLGPDYSQSNEYADIS 265

Query: 183 VMDINKVTNSSFPL*MQH 236
           + DI++V+ SSFPL M+H
Sbjct: 266 LKDIDQVSKSSFPLCMRH 283


>ref|NP_564893.2| DNA primase large subunit [Arabidopsis thaliana]
           gi|332196506|gb|AEE34627.1| DNA primase large subunit
           [Arabidopsis thaliana]
          Length = 449

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/78 (79%), Positives = 73/78 (93%)
 Frame = +3

Query: 3   SLVVTQFRSHLSKALVLTNRKWTSTIREQEKDRLTPIVEALSTSYLGPDYSQPKEFSEIS 182
           SLVVTQFRSHLSKAL+LTNRKWT+TIRE+EKDRLTPIVEALSTSYLGPDYSQ  E+++IS
Sbjct: 206 SLVVTQFRSHLSKALILTNRKWTTTIREREKDRLTPIVEALSTSYLGPDYSQSNEYADIS 265

Query: 183 VMDINKVTNSSFPL*MQH 236
           + DI++V+ SSFPL M+H
Sbjct: 266 LKDIDQVSKSSFPLCMRH 283