BLASTX nr result

ID: Coptis23_contig00042514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042514
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23840.3| unnamed protein product [Vitis vinifera]               58   7e-07
ref|XP_002273123.1| PREDICTED: F-box protein At1g10780 [Vitis vi...    58   7e-07
emb|CAN82469.1| hypothetical protein VITISV_039785 [Vitis vinifera]    58   7e-07

>emb|CBI23840.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -3

Query: 310 ILQMKNSHSSADEFFEDICRFRYMNSKIVSIE 215
           ILQMK++HSS D+FFEDICRFRYMN KIV IE
Sbjct: 357 ILQMKSNHSSVDDFFEDICRFRYMNRKIVRIE 388


>ref|XP_002273123.1| PREDICTED: F-box protein At1g10780 [Vitis vinifera]
          Length = 422

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -3

Query: 310 ILQMKNSHSSADEFFEDICRFRYMNSKIVSIE 215
           ILQMK++HSS D+FFEDICRFRYMN KIV IE
Sbjct: 391 ILQMKSNHSSVDDFFEDICRFRYMNRKIVRIE 422


>emb|CAN82469.1| hypothetical protein VITISV_039785 [Vitis vinifera]
          Length = 405

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -3

Query: 310 ILQMKNSHSSADEFFEDICRFRYMNSKIVSIE 215
           ILQMK++HSS D+FFEDICRFRYMN KIV IE
Sbjct: 374 ILQMKSNHSSVDDFFEDICRFRYMNRKIVRIE 405


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