BLASTX nr result
ID: Coptis23_contig00042508
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00042508 (306 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002511146.1| conserved hypothetical protein [Ricinus comm... 62 6e-08 ref|XP_002284098.1| PREDICTED: uncharacterized protein LOC100266... 56 3e-06 >ref|XP_002511146.1| conserved hypothetical protein [Ricinus communis] gi|223550261|gb|EEF51748.1| conserved hypothetical protein [Ricinus communis] Length = 177 Score = 61.6 bits (148), Expect = 6e-08 Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 20/121 (16%) Frame = -2 Query: 305 NIIVVFLIGESKLVASKASPVTE--IYNEYVNRSVSLHKIPTLREKQD------------ 168 N+I++ LIGESK S + P YNEYVNR L TL EK+ Sbjct: 52 NLIIILLIGESKFFTSNSIPAATDAYYNEYVNRKRGLRNSSTLEEKKATNTNTSFKENAS 111 Query: 167 ---EG---IKMDVFENGXXXXXXXXXXXXXXXXXXXXXEDLPAEELHKRVEDFIARVNKQ 6 EG IK++V++ G LPAEEL+KR +DFIARVN+Q Sbjct: 112 KSCEGVKKIKVEVWDEGNSEVAEKEREDLDGEEEI----SLPAEELNKRADDFIARVNRQ 167 Query: 5 R 3 R Sbjct: 168 R 168 >ref|XP_002284098.1| PREDICTED: uncharacterized protein LOC100266186 isoform 1 [Vitis vinifera] Length = 187 Score = 56.2 bits (134), Expect = 3e-06 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 7/108 (6%) Frame = -2 Query: 305 NIIVVFLIGESKLVASKASPVTEI-YNEYVNRSVSLHKIPTLREKQDE------GIKMDV 147 ++I++FL+G+SK + S++SP +E+ Y+EYV+ S +L + EK + K++ Sbjct: 74 SLIIIFLVGDSKALTSESSPASEVYYDEYVSVSRNLWSLSGHEEKGEMKGEKFFEEKVER 133 Query: 146 FENGXXXXXXXXXXXXXXXXXXXXXEDLPAEELHKRVEDFIARVNKQR 3 ++NG E+L EL+KR +DFIAR+N+QR Sbjct: 134 YKNGEGGKWKKWEMEKKPKVKLGGEENLSLPELNKRADDFIARINRQR 181