BLASTX nr result

ID: Coptis23_contig00042508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042508
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511146.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
ref|XP_002284098.1| PREDICTED: uncharacterized protein LOC100266...    56   3e-06

>ref|XP_002511146.1| conserved hypothetical protein [Ricinus communis]
           gi|223550261|gb|EEF51748.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 177

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 20/121 (16%)
 Frame = -2

Query: 305 NIIVVFLIGESKLVASKASPVTE--IYNEYVNRSVSLHKIPTLREKQD------------ 168
           N+I++ LIGESK   S + P      YNEYVNR   L    TL EK+             
Sbjct: 52  NLIIILLIGESKFFTSNSIPAATDAYYNEYVNRKRGLRNSSTLEEKKATNTNTSFKENAS 111

Query: 167 ---EG---IKMDVFENGXXXXXXXXXXXXXXXXXXXXXEDLPAEELHKRVEDFIARVNKQ 6
              EG   IK++V++ G                       LPAEEL+KR +DFIARVN+Q
Sbjct: 112 KSCEGVKKIKVEVWDEGNSEVAEKEREDLDGEEEI----SLPAEELNKRADDFIARVNRQ 167

Query: 5   R 3
           R
Sbjct: 168 R 168


>ref|XP_002284098.1| PREDICTED: uncharacterized protein LOC100266186 isoform 1 [Vitis
           vinifera]
          Length = 187

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
 Frame = -2

Query: 305 NIIVVFLIGESKLVASKASPVTEI-YNEYVNRSVSLHKIPTLREKQDE------GIKMDV 147
           ++I++FL+G+SK + S++SP +E+ Y+EYV+ S +L  +    EK +         K++ 
Sbjct: 74  SLIIIFLVGDSKALTSESSPASEVYYDEYVSVSRNLWSLSGHEEKGEMKGEKFFEEKVER 133

Query: 146 FENGXXXXXXXXXXXXXXXXXXXXXEDLPAEELHKRVEDFIARVNKQR 3
           ++NG                     E+L   EL+KR +DFIAR+N+QR
Sbjct: 134 YKNGEGGKWKKWEMEKKPKVKLGGEENLSLPELNKRADDFIARINRQR 181


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