BLASTX nr result

ID: Coptis23_contig00041567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041567
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525253.1| conserved hypothetical protein [Ricinus comm...    78   7e-13
ref|XP_002313900.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
emb|CAN72960.1| hypothetical protein VITISV_008500 [Vitis vinifera]    75   7e-12
emb|CBI22475.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002263494.1| PREDICTED: uncharacterized protein LOC100256...    74   2e-11

>ref|XP_002525253.1| conserved hypothetical protein [Ricinus communis]
           gi|223535411|gb|EEF37081.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 354

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 39/76 (51%), Positives = 51/76 (67%)
 Frame = +1

Query: 76  SSSVERSHSINAPLGIYMNTRGARKTLRRSFLSALHPESMCNSYELPDTLSLKKQLERKL 255
           S S+     + APLGI  NT+GARK L     S  H ++  NS ELPDT  L+K+L++KL
Sbjct: 185 SPSIYSRSPVRAPLGIPFNTKGARKVLCNPLASCYHMDTCHNSGELPDTKLLRKRLQQKL 244

Query: 256 ESEGLSISVDCANILN 303
           E EG+ +SVDCAN+LN
Sbjct: 245 EMEGVKVSVDCANLLN 260


>ref|XP_002313900.1| predicted protein [Populus trichocarpa] gi|222850308|gb|EEE87855.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = +1

Query: 67  MIVSSSVERSHSINAPLGIYMNTRGARKTLRRSFLSALH-PESMCNSYELPDTLSLKKQL 243
           M VS  V+    + AP GI +N  G+RK L    + + + PE+  NS ELPDT SL+ +L
Sbjct: 188 MAVSPGVQSRSPVTAPFGISLNPGGSRKALSNISIGSNYIPETCLNSGELPDTRSLRSRL 247

Query: 244 ERKLESEGLSISVDCANILN 303
           ERKLE EG+ +S+DC N+LN
Sbjct: 248 ERKLEMEGIGVSLDCVNVLN 267


>emb|CAN72960.1| hypothetical protein VITISV_008500 [Vitis vinifera]
          Length = 354

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/76 (52%), Positives = 49/76 (64%)
 Frame = +1

Query: 76  SSSVERSHSINAPLGIYMNTRGARKTLRRSFLSALHPESMCNSYELPDTLSLKKQLERKL 255
           S SV+    + AP GI MN  G RK+L    +   HPE+  NS ELPDT SL+  LERKL
Sbjct: 190 SPSVQSRSPVRAPFGISMNM-GGRKSLCNGSVCNYHPETCHNSGELPDTGSLRSHLERKL 248

Query: 256 ESEGLSISVDCANILN 303
           E EG S+S+DC N+LN
Sbjct: 249 EMEGFSVSMDCVNLLN 264


>emb|CBI22475.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/76 (51%), Positives = 48/76 (63%)
 Frame = +1

Query: 76  SSSVERSHSINAPLGIYMNTRGARKTLRRSFLSALHPESMCNSYELPDTLSLKKQLERKL 255
           S SV+    + AP GI MN  G RK+L    +   HPE+  NS ELPDT SL+  LERKL
Sbjct: 131 SPSVQSRSPVRAPFGISMNM-GGRKSLCNGSICNYHPETCHNSGELPDTGSLRSHLERKL 189

Query: 256 ESEGLSISVDCANILN 303
           E EG  +S+DC N+LN
Sbjct: 190 EMEGFGVSMDCVNLLN 205


>ref|XP_002263494.1| PREDICTED: uncharacterized protein LOC100256708 [Vitis vinifera]
          Length = 354

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/76 (51%), Positives = 48/76 (63%)
 Frame = +1

Query: 76  SSSVERSHSINAPLGIYMNTRGARKTLRRSFLSALHPESMCNSYELPDTLSLKKQLERKL 255
           S SV+    + AP GI MN  G RK+L    +   HPE+  NS ELPDT SL+  LERKL
Sbjct: 190 SPSVQSRSPVRAPFGISMNM-GGRKSLCNGSICNYHPETCHNSGELPDTGSLRSHLERKL 248

Query: 256 ESEGLSISVDCANILN 303
           E EG  +S+DC N+LN
Sbjct: 249 EMEGFGVSMDCVNLLN 264


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