BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040482
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ...   197   6e-49
ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat...   195   3e-48
ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   191   5e-47
ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat...   191   5e-47
ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat...   183   1e-44

>ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355499507|gb|AES80710.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  197 bits (502), Expect = 6e-49
 Identities = 95/140 (67%), Positives = 112/140 (80%), Gaps = 1/140 (0%)
 Frame = +1

Query: 1    DELENFMVQMPFEPDEVMWSSVLHSCKIHGNQELAQKSADRLFNME-LRDAGPYVMMSNI 177
            DE E  M QMPFEPDE+MWSSVL+SC IH NQELA+K+A++LFNM+ LRDA PYV MSNI
Sbjct: 655  DEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNI 714

Query: 178  FAAAGKWDDVGRVKKSMRERGVKKVPAHSWVEIKQKTHVFSSNDKMHPQMDAINRXXXXX 357
            +AAAG+WD+VG+VKK+MRERGVKKVPA+SWVEIK KTHVF++NDK HPQM  I +     
Sbjct: 715  YAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDEL 774

Query: 358  XXXXXXXGYKPDTRCYLHNV 417
                   GYKPD+ C LHNV
Sbjct: 775  EEKMVKKGYKPDSSCALHNV 794


>ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At2g01510-like [Glycine max]
          Length = 815

 Score =  195 bits (496), Expect = 3e-48
 Identities = 92/140 (65%), Positives = 110/140 (78%), Gaps = 1/140 (0%)
 Frame = +1

Query: 1    DELENFMVQMPFEPDEVMWSSVLHSCKIHGNQELAQKSADRLFNME-LRDAGPYVMMSNI 177
            DE E  M +MPFEPDE+MWSS+L+SC+IH NQELA K+AD+LFNM+ LRDA PYV MSNI
Sbjct: 596  DEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNI 655

Query: 178  FAAAGKWDDVGRVKKSMRERGVKKVPAHSWVEIKQKTHVFSSNDKMHPQMDAINRXXXXX 357
            +AAAG+WD VG+VKK++RERG++KVPA+SWVEIKQKTHVFS+ND  HPQ   I R     
Sbjct: 656  YAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDEL 715

Query: 358  XXXXXXXGYKPDTRCYLHNV 417
                   GYKPD+ C LHNV
Sbjct: 716  EKQMEEQGYKPDSTCALHNV 735


>ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At2g01510-like [Cucumis
            sativus]
          Length = 816

 Score =  191 bits (485), Expect = 5e-47
 Identities = 90/140 (64%), Positives = 109/140 (77%), Gaps = 1/140 (0%)
 Frame = +1

Query: 1    DELENFMVQMPFEPDEVMWSSVLHSCKIHGNQELAQKSADRLFNME-LRDAGPYVMMSNI 177
            DE E  M +MPFEP E+MWSSVL+SC+IH N ELA+K+ADRLFNME LRDA PY+ MSNI
Sbjct: 597  DEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNI 656

Query: 178  FAAAGKWDDVGRVKKSMRERGVKKVPAHSWVEIKQKTHVFSSNDKMHPQMDAINRXXXXX 357
            +A AG+WD+V +VKK+MR+RGV+KVPA+SWVEIK +THVFS+NDK HP+M  I R     
Sbjct: 657  YAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINAL 716

Query: 358  XXXXXXXGYKPDTRCYLHNV 417
                   GYKPDT C LH+V
Sbjct: 717  SKEMEKKGYKPDTTCALHDV 736


>ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  191 bits (485), Expect = 5e-47
 Identities = 90/140 (64%), Positives = 109/140 (77%), Gaps = 1/140 (0%)
 Frame = +1

Query: 1    DELENFMVQMPFEPDEVMWSSVLHSCKIHGNQELAQKSADRLFNME-LRDAGPYVMMSNI 177
            DE E  M +MPFEP E+MWSSVL+SC+IH N ELA+K+ADRLFNME LRDA PY+ MSNI
Sbjct: 597  DEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNI 656

Query: 178  FAAAGKWDDVGRVKKSMRERGVKKVPAHSWVEIKQKTHVFSSNDKMHPQMDAINRXXXXX 357
            +A AG+WD+V +VKK+MR+RGV+KVPA+SWVEIK +THVFS+NDK HP+M  I R     
Sbjct: 657  YAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINAL 716

Query: 358  XXXXXXXGYKPDTRCYLHNV 417
                   GYKPDT C LH+V
Sbjct: 717  SKEMEKKGYKPDTTCALHDV 736


>ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  183 bits (464), Expect = 1e-44
 Identities = 83/139 (59%), Positives = 110/139 (79%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1    DELENFMVQMPFEPDEVMWSSVLHSCKIHGNQELAQKSADRLFNME-LRDAGPYVMMSNI 177
            +E E  M +MP +PDE+MWSSVL++C+IH NQELA+++AD+LFNME LRDA PYV MSNI
Sbjct: 606  NEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNI 665

Query: 178  FAAAGKWDDVGRVKKSMRERGVKKVPAHSWVEIKQKTHVFSSNDKMHPQMDAINRXXXXX 357
            +AAAG+W++V +V K+MR+RGVKK+PA+SWVEIK +TH+FS+ND+ HPQ++ I +     
Sbjct: 666  YAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDML 725

Query: 358  XXXXXXXGYKPDTRCYLHN 414
                   GYKPDT C LHN
Sbjct: 726  TKTMEELGYKPDTSCALHN 744