BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040413
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779...    41   5e-06
ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containi...    38   5e-06
ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat...    39   6e-06

>ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score = 41.2 bits (95), Expect(2) = 5e-06
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -1

Query: 103 NTMIDGLCKGGLLEEAN*LLIKVEEKGCLLDYI 5
           N MIDG CK GLLEEA  +L K+E+ GC+ D +
Sbjct: 483 NVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAV 515



 Score = 33.9 bits (76), Expect(2) = 5e-06
 Identities = 20/73 (27%), Positives = 32/73 (43%)
 Frame = -3

Query: 323 VITNNSLICGSCTSGHQKEPSELFDEISDVAXXXXXXXXXXXXMHFAKKEKINGAIKVFS 144
           ++T +SLI G C SG      +L DE+ D                  K   ++ AI +F+
Sbjct: 374 IVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFN 433

Query: 143 SVVDAGYKPDAVT 105
            + D G +P+  T
Sbjct: 434 KMKDQGIRPNTFT 446


>ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score = 37.7 bits (86), Expect(2) = 5e-06
 Identities = 22/71 (30%), Positives = 32/71 (45%)
 Frame = -3

Query: 326 DVITNNSLICGSCTSGHQKEPSELFDEISDVAXXXXXXXXXXXXMHFAKKEKINGAIKVF 147
           DVIT NSLI G C +GH  +   LF+++ D                  K  ++  A +VF
Sbjct: 656 DVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVF 715

Query: 146 SSVVDAGYKPD 114
             ++  GY  D
Sbjct: 716 QDLLTKGYHLD 726



 Score = 37.4 bits (85), Expect(2) = 5e-06
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = -1

Query: 103 NTMIDGLCKGGLLEEAN*LLIKVEEKGCL 17
           N MI G CK GLLEEA  +L K+EE GC+
Sbjct: 731 NVMIYGHCKQGLLEEALTMLSKMEENGCI 759


>ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score = 38.5 bits (88), Expect(2) = 6e-06
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -1

Query: 103 NTMIDGLCKGGLLEEAN*LLIKVEEKGCL 17
           N MI+G CK GLLEEA  +L K+EE GC+
Sbjct: 483 NVMINGHCKQGLLEEALTMLSKMEENGCV 511



 Score = 36.2 bits (82), Expect(2) = 6e-06
 Identities = 22/75 (29%), Positives = 32/75 (42%)
 Frame = -3

Query: 338 GILLDVITNNSLICGSCTSGHQKEPSELFDEISDVAXXXXXXXXXXXXMHFAKKEKINGA 159
           GI  +VIT NSLI G C +GH      LF+++ D                  K  ++  A
Sbjct: 404 GIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDA 463

Query: 158 IKVFSSVVDAGYKPD 114
            + F  ++  GY  D
Sbjct: 464 QEAFQDLLTKGYHLD 478