BLASTX nr result

ID: Coptis23_contig00040384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040384
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298589.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29
ref|XP_002271033.2| PREDICTED: myb-related protein 315-like [Vit...   130   1e-28
emb|CBI17697.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_003548543.1| PREDICTED: myb-related protein 315-like [Gly...   128   4e-28
ref|XP_003555012.1| PREDICTED: myb-related protein 315-like [Gly...   124   6e-27

>ref|XP_002298589.1| predicted protein [Populus trichocarpa] gi|222845847|gb|EEE83394.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/116 (56%), Positives = 83/116 (71%), Gaps = 5/116 (4%)
 Frame = +2

Query: 2   LKRGPLTEDEEEQIIQLHARLGNRWSKIAAHFPGRTDNEIKNHWNTRIKKRLKLLGLDPA 181
           LKRG  T+ E+ QIIQLH+RLGNRWSKIA+HFPGRTDNEIKNHWNTRIKK+LK+LGLDP 
Sbjct: 65  LKRGGFTKMEDNQIIQLHSRLGNRWSKIASHFPGRTDNEIKNHWNTRIKKKLKVLGLDPV 124

Query: 182 THKPTEQSVK-----HDTEIERTSRSNDEDTSLQFKPSDSTALDTLPITEKKQEVE 334
           THKP EQ+ K      D  I+ +    +++ SL+ K  D     +  + E+ Q++E
Sbjct: 125 THKPIEQTEKDVSGEEDETIQESVSLKEQEESLEVKSEDRDQAKSDFVQERDQKLE 180


>ref|XP_002271033.2| PREDICTED: myb-related protein 315-like [Vitis vinifera]
          Length = 268

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/108 (62%), Positives = 77/108 (71%)
 Frame = +2

Query: 2   LKRGPLTEDEEEQIIQLHARLGNRWSKIAAHFPGRTDNEIKNHWNTRIKKRLKLLGLDPA 181
           LKRG L+E EE QIIQLH+RLGNRWSKIA+HFPGRTDNEIKNHWNTRIKKRLK LGLDP 
Sbjct: 65  LKRGALSEVEENQIIQLHSRLGNRWSKIASHFPGRTDNEIKNHWNTRIKKRLKQLGLDPV 124

Query: 182 THKPTEQSVKHDTEIERTSRSNDEDTSLQFKPSDSTALDTLPITEKKQ 325
           THKP E+    D   E+     D  +S Q +  +    DTL   ++KQ
Sbjct: 125 THKPIEEK---DEVNEKNDTVPDSASSKQQEERNGERGDTLDTVQEKQ 169


>emb|CBI17697.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/108 (62%), Positives = 77/108 (71%)
 Frame = +2

Query: 2   LKRGPLTEDEEEQIIQLHARLGNRWSKIAAHFPGRTDNEIKNHWNTRIKKRLKLLGLDPA 181
           LKRG L+E EE QIIQLH+RLGNRWSKIA+HFPGRTDNEIKNHWNTRIKKRLK LGLDP 
Sbjct: 65  LKRGALSEVEENQIIQLHSRLGNRWSKIASHFPGRTDNEIKNHWNTRIKKRLKQLGLDPV 124

Query: 182 THKPTEQSVKHDTEIERTSRSNDEDTSLQFKPSDSTALDTLPITEKKQ 325
           THKP E+    D   E+     D  +S Q +  +    DTL   ++KQ
Sbjct: 125 THKPIEEK---DEVNEKNDTVPDSASSKQQEERNGERGDTLDTVQEKQ 169


>ref|XP_003548543.1| PREDICTED: myb-related protein 315-like [Glycine max]
          Length = 276

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/113 (57%), Positives = 78/113 (69%), Gaps = 4/113 (3%)
 Frame = +2

Query: 2   LKRGPLTEDEEEQIIQLHARLGNRWSKIAAHFPGRTDNEIKNHWNTRIKKRLKLLGLDPA 181
           LKRG  TE EE+QII+LH+ LGNRWSKIA+HFPGRTDNEIKNHWNTRIKKRLKLLGLDP 
Sbjct: 65  LKRGGFTEMEEDQIIELHSGLGNRWSKIASHFPGRTDNEIKNHWNTRIKKRLKLLGLDPV 124

Query: 182 THKPTEQSVKHDTEIERT----SRSNDEDTSLQFKPSDSTALDTLPITEKKQE 328
           THKP EQ    D    +T    S     + +++ K  ++     +  TE K+E
Sbjct: 125 THKPIEQKENTDENTNKTNPHPSIFGGSEENVEIKSLENGGTKEMAKTEGKRE 177


>ref|XP_003555012.1| PREDICTED: myb-related protein 315-like [Glycine max]
          Length = 273

 Score =  124 bits (312), Expect = 6e-27
 Identities = 68/113 (60%), Positives = 80/113 (70%), Gaps = 4/113 (3%)
 Frame = +2

Query: 2   LKRGPLTEDEEEQIIQLHARLGNRWSKIAAHFPGRTDNEIKNHWNTRIKKRLKLLGLDPA 181
           LKRG  TE EE+QIIQLH+ LGNRWSKIA+HFPGRTDNEIKNHWNT+IKKRLKLLGLDP 
Sbjct: 65  LKRGGFTEMEEDQIIQLHSCLGNRWSKIASHFPGRTDNEIKNHWNTKIKKRLKLLGLDPL 124

Query: 182 THKPTEQ---SVKHDTEIE-RTSRSNDEDTSLQFKPSDSTALDTLPITEKKQE 328
           T KP+EQ   SV     IE + + S   +  ++ K  D  +   +P TE K E
Sbjct: 125 TLKPSEQKEKSVDDKKNIELQPNTSKGSEQGVENKSLDMHSTREVPKTEGKIE 177


Top