BLASTX nr result

ID: Coptis23_contig00040368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040368
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus]              71   1e-10
emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catha...    71   1e-10
ref|NP_178811.7| multidrug resistance-associated protein 11 [Ara...    62   4e-08
sp|Q9SKX0.3|AB13C_ARATH RecName: Full=ABC transporter C family m...    62   4e-08

>gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus]
          Length = 296

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/83 (46%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
 Frame = -1

Query: 259 DSTLVWDGNGYLPVSLC--NIVLGFGVNLITILVIAVLGVTKRNAQTSTRIRRMIFLEKI 86
           DS  VW+GNG   VS C  NIVLGFG N+ T++VI ++GVT+R+ +   R RR+    KI
Sbjct: 10  DSPYVWNGNG---VSRCFSNIVLGFGANMATLIVIVLVGVTRRSGR---RSRRIHLSAKI 63

Query: 85  FWYLLPSLGACLSFYEMVLLTKR 17
             + +P+LGA +SF+E+V+L ++
Sbjct: 64  LLFTVPALGAFVSFFEIVVLLRK 86


>emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catharanthus roseus]
          Length = 1457

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/83 (46%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
 Frame = -1

Query: 259 DSTLVWDGNGYLPVSLC--NIVLGFGVNLITILVIAVLGVTKRNAQTSTRIRRMIFLEKI 86
           DS  VW+GNG   VS C  NIVLGFG N+ T++VI ++GVT+R+ +   R RR+    KI
Sbjct: 10  DSPYVWNGNG---VSRCFSNIVLGFGANMATLIVIVLVGVTRRSGR---RSRRIHLSAKI 63

Query: 85  FWYLLPSLGACLSFYEMVLLTKR 17
             + +P+LGA +SF+E+V+L ++
Sbjct: 64  LLFTVPALGAFVSFFEIVVLLRK 86


>ref|NP_178811.7| multidrug resistance-associated protein 11 [Arabidopsis thaliana]
           gi|330251033|gb|AEC06127.1| multidrug
           resistance-associated protein 11 [Arabidopsis thaliana]
          Length = 1404

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/65 (46%), Positives = 47/65 (72%)
 Frame = -1

Query: 214 LCNIVLGFGVNLITILVIAVLGVTKRNAQTSTRIRRMIFLEKIFWYLLPSLGACLSFYEM 35
           L +IVLGFG N++T+L+I +L +T+RN + +   RR  ++EK   Y+ P+LGACLS  ++
Sbjct: 20  LGDIVLGFGANVVTLLLILILTITRRNGRCN---RRKSYIEKCLLYVTPALGACLSCVDL 76

Query: 34  VLLTK 20
           VLL +
Sbjct: 77  VLLVR 81


>sp|Q9SKX0.3|AB13C_ARATH RecName: Full=ABC transporter C family member 13; Short=ABC
           transporter ABCC.13; Short=AtABCC13; AltName:
           Full=ATP-energized glutathione S-conjugate pump 11;
           AltName: Full=Glutathione S-conjugate-transporting
           ATPase 11; AltName: Full=Multidrug resistance-associated
           protein 11
          Length = 1410

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/65 (46%), Positives = 47/65 (72%)
 Frame = -1

Query: 214 LCNIVLGFGVNLITILVIAVLGVTKRNAQTSTRIRRMIFLEKIFWYLLPSLGACLSFYEM 35
           L +IVLGFG N++T+L+I +L +T+RN + +   RR  ++EK   Y+ P+LGACLS  ++
Sbjct: 20  LGDIVLGFGANVVTLLLILILTITRRNGRCN---RRKSYIEKCLLYVTPALGACLSCVDL 76

Query: 34  VLLTK 20
           VLL +
Sbjct: 77  VLLVR 81


Top