BLASTX nr result

ID: Coptis23_contig00040363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040363
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279040.1| PREDICTED: homologous-pairing protein 2 homo...   176   2e-42
emb|CAN68343.1| hypothetical protein VITISV_004017 [Vitis vinifera]   176   2e-42
ref|XP_002464006.1| hypothetical protein SORBIDRAFT_01g010480 [S...   175   3e-42
gb|AFW67854.1| hypothetical protein ZEAMMB73_757451 [Zea mays]        172   3e-41
ref|NP_001149081.1| LOC100282702 [Zea mays] gi|195624550|gb|ACG3...   172   3e-41

>ref|XP_002279040.1| PREDICTED: homologous-pairing protein 2 homolog [Vitis vinifera]
           gi|297737839|emb|CBI27040.3| unnamed protein product
           [Vitis vinifera]
          Length = 226

 Score =  176 bits (445), Expect = 2e-42
 Identities = 89/114 (78%), Positives = 105/114 (92%)
 Frame = +2

Query: 2   SVQKALDSLSESGKISFKEYGKQKIYIARQDQFDIPSSEELDQMKKDNAKLQQELEDQKR 181
           SVQKALD+L++SG+IS KEYGKQKIY+ARQDQFDIP+SEEL +MK++NAKLQQ+LE+QKR
Sbjct: 41  SVQKALDALADSGRISSKEYGKQKIYLARQDQFDIPNSEELSRMKEENAKLQQQLEEQKR 100

Query: 182 AISEVEGEIRALQSNLTLEEICAKEVKLKTEVHEMEEKLSKLRGGVTLVRPEDR 343
           AISEVEGEI+ LQSNLTLE+I AKE KLK EV EME+KL+ LRGGVTLV+ EDR
Sbjct: 101 AISEVEGEIKTLQSNLTLEQIRAKEAKLKMEVEEMEDKLNNLRGGVTLVKFEDR 154


>emb|CAN68343.1| hypothetical protein VITISV_004017 [Vitis vinifera]
          Length = 223

 Score =  176 bits (445), Expect = 2e-42
 Identities = 89/114 (78%), Positives = 105/114 (92%)
 Frame = +2

Query: 2   SVQKALDSLSESGKISFKEYGKQKIYIARQDQFDIPSSEELDQMKKDNAKLQQELEDQKR 181
           SVQKALD+L++SG+IS KEYGKQKIY+ARQDQFDIP+SEEL +MK++NAKLQQ+LE+QKR
Sbjct: 38  SVQKALDALADSGRISSKEYGKQKIYLARQDQFDIPNSEELSRMKEENAKLQQQLEEQKR 97

Query: 182 AISEVEGEIRALQSNLTLEEICAKEVKLKTEVHEMEEKLSKLRGGVTLVRPEDR 343
           AISEVEGEI+ LQSNLTLE+I AKE KLK EV EME+KL+ LRGGVTLV+ EDR
Sbjct: 98  AISEVEGEIKTLQSNLTLEQIRAKEAKLKMEVEEMEDKLNNLRGGVTLVKFEDR 151


>ref|XP_002464006.1| hypothetical protein SORBIDRAFT_01g010480 [Sorghum bicolor]
           gi|241917860|gb|EER91004.1| hypothetical protein
           SORBIDRAFT_01g010480 [Sorghum bicolor]
          Length = 227

 Score =  175 bits (444), Expect = 3e-42
 Identities = 87/114 (76%), Positives = 104/114 (91%)
 Frame = +2

Query: 2   SVQKALDSLSESGKISFKEYGKQKIYIARQDQFDIPSSEELDQMKKDNAKLQQELEDQKR 181
           +VQKALD+L++SG+ISFKEYGKQKIYIARQDQF+IP+ EEL++MKK NAKLQ+EL DQK+
Sbjct: 41  AVQKALDALADSGQISFKEYGKQKIYIARQDQFEIPNGEELEEMKKRNAKLQEELADQKK 100

Query: 182 AISEVEGEIRALQSNLTLEEICAKEVKLKTEVHEMEEKLSKLRGGVTLVRPEDR 343
           AISEVE E+R LQSNLTL EI +KE KL++EV EMEEKL+KLR GVTLV+PEDR
Sbjct: 101 AISEVESEVRGLQSNLTLAEITSKETKLQSEVQEMEEKLNKLRSGVTLVKPEDR 154


>gb|AFW67854.1| hypothetical protein ZEAMMB73_757451 [Zea mays]
          Length = 212

 Score =  172 bits (436), Expect = 3e-41
 Identities = 85/114 (74%), Positives = 104/114 (91%)
 Frame = +2

Query: 2   SVQKALDSLSESGKISFKEYGKQKIYIARQDQFDIPSSEELDQMKKDNAKLQQELEDQKR 181
           +VQKALD+L++SG+ISFKEYGKQKIYIARQDQFDIP+ EEL++MKK NAKLQ+EL DQK+
Sbjct: 26  AVQKALDALADSGQISFKEYGKQKIYIARQDQFDIPNGEELEEMKKTNAKLQEELADQKK 85

Query: 182 AISEVEGEIRALQSNLTLEEICAKEVKLKTEVHEMEEKLSKLRGGVTLVRPEDR 343
           AISEVE E+R LQSNLTL EI +K+ +L++EV EMEEKL+KLR GVTLV+PED+
Sbjct: 86  AISEVESEVRGLQSNLTLTEITSKKSELQSEVQEMEEKLNKLRSGVTLVKPEDK 139


>ref|NP_001149081.1| LOC100282702 [Zea mays] gi|195624550|gb|ACG34105.1| pairing protein
           meu13-like [Zea mays] gi|413933302|gb|AFW67853.1|
           pairing protein meu13-like protein [Zea mays]
          Length = 227

 Score =  172 bits (436), Expect = 3e-41
 Identities = 85/114 (74%), Positives = 104/114 (91%)
 Frame = +2

Query: 2   SVQKALDSLSESGKISFKEYGKQKIYIARQDQFDIPSSEELDQMKKDNAKLQQELEDQKR 181
           +VQKALD+L++SG+ISFKEYGKQKIYIARQDQFDIP+ EEL++MKK NAKLQ+EL DQK+
Sbjct: 41  AVQKALDALADSGQISFKEYGKQKIYIARQDQFDIPNGEELEEMKKTNAKLQEELADQKK 100

Query: 182 AISEVEGEIRALQSNLTLEEICAKEVKLKTEVHEMEEKLSKLRGGVTLVRPEDR 343
           AISEVE E+R LQSNLTL EI +K+ +L++EV EMEEKL+KLR GVTLV+PED+
Sbjct: 101 AISEVESEVRGLQSNLTLTEITSKKSELQSEVQEMEEKLNKLRSGVTLVKPEDK 154


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