BLASTX nr result

ID: Coptis23_contig00040339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040339
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX33316.1| secondary cell wall-related glycosyltransferase f...   120   1e-25
ref|XP_002307480.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_002278157.2| PREDICTED: uncharacterized protein LOC100245...   116   2e-24
emb|CBI19971.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002517237.1| glycogenin, putative [Ricinus communis] gi|2...   113   2e-23

>gb|AAX33316.1| secondary cell wall-related glycosyltransferase family 8 [Populus
           tremula x Populus tremuloides]
          Length = 649

 Score =  120 bits (300), Expect = 1e-25
 Identities = 53/89 (59%), Positives = 69/89 (77%)
 Frame = +1

Query: 1   RWMRERPILDPRYVSHLDINWDQILRTIGKMTETHSCRGIGLLNFNESETNLWKRRMPDA 180
           RW R+   +DPRY+S+LDINWDQI   I K+ +++  +GIGLLNFNESE N WK  + D 
Sbjct: 100 RWTRDGAAVDPRYISNLDINWDQISDNIVKLDDSNEYQGIGLLNFNESEINNWKLMLLDV 159

Query: 181 IHVSVHLDYVRDNVTWESLYPEWIDEEQE 267
            HV +HL++V ++VTWESLYPEWIDEE+E
Sbjct: 160 EHVVLHLEHVAEDVTWESLYPEWIDEEEE 188


>ref|XP_002307480.1| predicted protein [Populus trichocarpa] gi|222856929|gb|EEE94476.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score =  118 bits (296), Expect = 4e-25
 Identities = 52/89 (58%), Positives = 68/89 (76%)
 Frame = +1

Query: 1   RWMRERPILDPRYVSHLDINWDQILRTIGKMTETHSCRGIGLLNFNESETNLWKRRMPDA 180
           RW R+   +DPRY+S LD+NWDQI   I K+ +++  +GIGLLNFNESE N WK  + D 
Sbjct: 80  RWTRDGAAVDPRYISKLDVNWDQISDIIVKLDDSNEYQGIGLLNFNESEINNWKLMLLDV 139

Query: 181 IHVSVHLDYVRDNVTWESLYPEWIDEEQE 267
            HV +HL++V ++VTWESLYPEWIDEE+E
Sbjct: 140 EHVVLHLEHVAEDVTWESLYPEWIDEEEE 168


>ref|XP_002278157.2| PREDICTED: uncharacterized protein LOC100245489 [Vitis vinifera]
          Length = 637

 Score =  116 bits (290), Expect = 2e-24
 Identities = 50/89 (56%), Positives = 68/89 (76%)
 Frame = +1

Query: 1   RWMRERPILDPRYVSHLDINWDQILRTIGKMTETHSCRGIGLLNFNESETNLWKRRMPDA 180
           RW+R+    DPRY S L INWDQI + I K+ + +  +G+GLLNFN+ E + WK+ +PDA
Sbjct: 95  RWIRDAD--DPRYTSSLQINWDQISKVIEKLDDRNEYQGVGLLNFNDKENDDWKQLLPDA 152

Query: 181 IHVSVHLDYVRDNVTWESLYPEWIDEEQE 267
            H+ +HLD+V +N+TWESLYPEWIDEE+E
Sbjct: 153 EHIVLHLDHVLNNITWESLYPEWIDEEEE 181


>emb|CBI19971.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  116 bits (290), Expect = 2e-24
 Identities = 50/89 (56%), Positives = 68/89 (76%)
 Frame = +1

Query: 1   RWMRERPILDPRYVSHLDINWDQILRTIGKMTETHSCRGIGLLNFNESETNLWKRRMPDA 180
           RW+R+    DPRY S L INWDQI + I K+ + +  +G+GLLNFN+ E + WK+ +PDA
Sbjct: 95  RWIRDAD--DPRYTSSLQINWDQISKVIEKLDDRNEYQGVGLLNFNDKENDDWKQLLPDA 152

Query: 181 IHVSVHLDYVRDNVTWESLYPEWIDEEQE 267
            H+ +HLD+V +N+TWESLYPEWIDEE+E
Sbjct: 153 EHIVLHLDHVLNNITWESLYPEWIDEEEE 181


>ref|XP_002517237.1| glycogenin, putative [Ricinus communis] gi|223543608|gb|EEF45137.1|
           glycogenin, putative [Ricinus communis]
          Length = 630

 Score =  113 bits (282), Expect = 2e-23
 Identities = 49/80 (61%), Positives = 60/80 (75%)
 Frame = +1

Query: 28  DPRYVSHLDINWDQILRTIGKMTETHSCRGIGLLNFNESETNLWKRRMPDAIHVSVHLDY 207
           DPRYVS +D+NWD +++ I K++E +  RGIGLLNFN SE   WK  +PD I   + LDY
Sbjct: 95  DPRYVSDIDVNWDDVMKVIEKLSEQNDYRGIGLLNFNTSEVTYWKHLLPDVIPHVLQLDY 154

Query: 208 VRDNVTWESLYPEWIDEEQE 267
           V  N+TWESLYPEWIDEEQE
Sbjct: 155 VDRNITWESLYPEWIDEEQE 174


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