BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040334
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26320.3| unnamed protein product [Vitis vinifera]              138   5e-31
ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containi...   138   5e-31
ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_003555290.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   121   5e-26
ref|XP_003595326.1| Pentatricopeptide repeat-containing protein ...   114   8e-24

>emb|CBI26320.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score =  138 bits (347), Expect = 5e-31
 Identities = 60/80 (75%), Positives = 77/80 (96%)
 Frame = +3

Query: 3   ASRVHGNLELGQLALKNLIELEPETSGNYVLLSNMYASVNKWDDVEKVREVMKDQGVNKA 182
           A+RVHGNLE+G++ LK+LI+LEPETSGNYVLLSNMYAS+N+WDDV++VR++MKD G+NK 
Sbjct: 328 AARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINKV 387

Query: 183 PGSSLLEIGGAIHEFIMGDK 242
           PGSSL+E+GGA+HEF+MGDK
Sbjct: 388 PGSSLVEVGGAMHEFLMGDK 407


>ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Vitis vinifera]
          Length = 590

 Score =  138 bits (347), Expect = 5e-31
 Identities = 60/80 (75%), Positives = 77/80 (96%)
 Frame = +3

Query: 3   ASRVHGNLELGQLALKNLIELEPETSGNYVLLSNMYASVNKWDDVEKVREVMKDQGVNKA 182
           A+RVHGNLE+G++ LK+LI+LEPETSGNYVLLSNMYAS+N+WDDV++VR++MKD G+NK 
Sbjct: 396 AARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINKV 455

Query: 183 PGSSLLEIGGAIHEFIMGDK 242
           PGSSL+E+GGA+HEF+MGDK
Sbjct: 456 PGSSLVEVGGAMHEFLMGDK 475


>ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Glycine max]
          Length = 591

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/80 (70%), Positives = 72/80 (90%)
 Frame = +3

Query: 3   ASRVHGNLELGQLALKNLIELEPETSGNYVLLSNMYASVNKWDDVEKVREVMKDQGVNKA 182
           A+++HGNLE+G+ ALK+LIELEPETSGNYVLLSNMYAS+ +W+DV++VR +MKD GV+K 
Sbjct: 397 AAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGVDKL 456

Query: 183 PGSSLLEIGGAIHEFIMGDK 242
           PG SL+EI GA+HEF+ GDK
Sbjct: 457 PGFSLVEINGAMHEFLTGDK 476


>ref|XP_003555290.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g43790-like [Glycine max]
          Length = 516

 Score =  121 bits (304), Expect = 5e-26
 Identities = 55/80 (68%), Positives = 72/80 (90%)
 Frame = +3

Query: 3   ASRVHGNLELGQLALKNLIELEPETSGNYVLLSNMYASVNKWDDVEKVREVMKDQGVNKA 182
           A+++HGNLE+G+ ALK+LIELEPET GNYVLLSNMYAS+ +W+DV++VR +MKD+GV+K 
Sbjct: 339 AAKLHGNLEMGEAALKHLIELEPETRGNYVLLSNMYASIARWNDVKRVRMLMKDRGVDKL 398

Query: 183 PGSSLLEIGGAIHEFIMGDK 242
           PG SL+EI GA+HEF+ GDK
Sbjct: 399 PGFSLVEINGAMHEFLTGDK 418


>ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484374|gb|AES65577.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 740

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/80 (67%), Positives = 69/80 (86%)
 Frame = +3

Query: 3   ASRVHGNLELGQLALKNLIELEPETSGNYVLLSNMYASVNKWDDVEKVREVMKDQGVNKA 182
           A+R+HGNL +G++AL  LIELEPETSGNYVLLSNMYASV + +DV++VR++MK  GVNK 
Sbjct: 546 AARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKL 605

Query: 183 PGSSLLEIGGAIHEFIMGDK 242
           PG SL+EI GA+HEF+ GD+
Sbjct: 606 PGFSLVEIKGAMHEFLTGDR 625