BLASTX nr result

ID: Coptis23_contig00040320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040320
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002891338.1| CYCA3_3 [Arabidopsis lyrata subsp. lyrata] g...    56   3e-06
ref|NP_001241939.1| uncharacterized protein LOC100776207 [Glycin...    56   4e-06

>ref|XP_002891338.1| CYCA3_3 [Arabidopsis lyrata subsp. lyrata]
           gi|297337180|gb|EFH67597.1| CYCA3_3 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 326

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/77 (37%), Positives = 46/77 (59%)
 Frame = +3

Query: 165 KYLPLHDSMGSVQKRIDVEKRAVVVNEVARLAEILGYGTHCLCLSVGYLDRFLSSTEVDN 344
           K  PL D M  VQ+ +    R V+V+ +  +AE    G+  + L+V Y+DRFLSS  V+ 
Sbjct: 72  KLRPLDDYMEKVQEEVTPSSRGVLVDWLVEVAEEFELGSETIYLTVSYIDRFLSSKTVNE 131

Query: 345 DDLLVVAMASLLISSKY 395
             L +V ++++ I+SKY
Sbjct: 132 QKLQLVGVSAMFIASKY 148


>ref|NP_001241939.1| uncharacterized protein LOC100776207 [Glycine max]
           gi|255644242|gb|ACU22685.1| unknown [Glycine max]
          Length = 503

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/82 (36%), Positives = 50/82 (60%)
 Frame = +3

Query: 150 RKSTEKYLPLHDSMGSVQKRIDVEKRAVVVNEVARLAEILGYGTHCLCLSVGYLDRFLSS 329
           R+S EK  P  D M ++QK I+V  RA++V+ +  +AE        L L+V YLDR+LS 
Sbjct: 246 RESEEKKRPSTDFMDTIQKDINVSMRAILVDWLVEVAEEYRLVPETLYLTVNYLDRYLSG 305

Query: 330 TEVDNDDLLVVAMASLLISSKY 395
             ++   L ++ ++ ++I+SKY
Sbjct: 306 NAMNRQRLQLLGVSCMMIASKY 327


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