BLASTX nr result
ID: Coptis23_contig00040320
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00040320 (400 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002891338.1| CYCA3_3 [Arabidopsis lyrata subsp. lyrata] g... 56 3e-06 ref|NP_001241939.1| uncharacterized protein LOC100776207 [Glycin... 56 4e-06 >ref|XP_002891338.1| CYCA3_3 [Arabidopsis lyrata subsp. lyrata] gi|297337180|gb|EFH67597.1| CYCA3_3 [Arabidopsis lyrata subsp. lyrata] Length = 326 Score = 56.2 bits (134), Expect = 3e-06 Identities = 29/77 (37%), Positives = 46/77 (59%) Frame = +3 Query: 165 KYLPLHDSMGSVQKRIDVEKRAVVVNEVARLAEILGYGTHCLCLSVGYLDRFLSSTEVDN 344 K PL D M VQ+ + R V+V+ + +AE G+ + L+V Y+DRFLSS V+ Sbjct: 72 KLRPLDDYMEKVQEEVTPSSRGVLVDWLVEVAEEFELGSETIYLTVSYIDRFLSSKTVNE 131 Query: 345 DDLLVVAMASLLISSKY 395 L +V ++++ I+SKY Sbjct: 132 QKLQLVGVSAMFIASKY 148 >ref|NP_001241939.1| uncharacterized protein LOC100776207 [Glycine max] gi|255644242|gb|ACU22685.1| unknown [Glycine max] Length = 503 Score = 55.8 bits (133), Expect = 4e-06 Identities = 30/82 (36%), Positives = 50/82 (60%) Frame = +3 Query: 150 RKSTEKYLPLHDSMGSVQKRIDVEKRAVVVNEVARLAEILGYGTHCLCLSVGYLDRFLSS 329 R+S EK P D M ++QK I+V RA++V+ + +AE L L+V YLDR+LS Sbjct: 246 RESEEKKRPSTDFMDTIQKDINVSMRAILVDWLVEVAEEYRLVPETLYLTVNYLDRYLSG 305 Query: 330 TEVDNDDLLVVAMASLLISSKY 395 ++ L ++ ++ ++I+SKY Sbjct: 306 NAMNRQRLQLLGVSCMMIASKY 327