BLASTX nr result

ID: Coptis23_contig00040288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040288
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509542.1| conserved hypothetical protein [Ricinus comm...    75   5e-12
ref|XP_002522141.1| conserved hypothetical protein [Ricinus comm...    73   2e-11
ref|XP_002534054.1| conserved hypothetical protein [Ricinus comm...    68   9e-10
ref|XP_002336282.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002335272.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09

>ref|XP_002509542.1| conserved hypothetical protein [Ricinus communis]
           gi|223549441|gb|EEF50929.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
 Frame = +2

Query: 2   ENQLPFVILEKLFYLTKDHSRRGHSLNELLTNFF-NPILPTMGPV-QTNSHIKGKHILDL 175
           ENQ+P+++L+ LF +TK+ +     L +L   FF N       PV   N   K KHILDL
Sbjct: 177 ENQIPWLVLDCLFEMTKEENGNSEPLVQLAIEFFANMFSSAPSPVYDPNLLAKSKHILDL 236

Query: 176 LRNHLLPKAQHDMEYGDYPFWEYTHSATDLWETGVKFRKKNVADGLLDITFTDDGILEIP 355
           LRN L+    +  +  +   W+   SAT++ E+G+ F+K   A  +LDI F D GILEIP
Sbjct: 237 LRNWLIAPI-YPTQSNEVSEWQPFPSATEIKESGILFKKHEDAKSILDIRF-DKGILEIP 294

Query: 356 PFFFGES 376
                E+
Sbjct: 295 NLLIQET 301


>ref|XP_002522141.1| conserved hypothetical protein [Ricinus communis]
           gi|223538740|gb|EEF40341.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 415

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 45/119 (37%), Positives = 66/119 (55%)
 Frame = +2

Query: 2   ENQLPFVILEKLFYLTKDHSRRGHSLNELLTNFFNPILPTMGPVQTNSHIKGKHILDLLR 181
           ENQLP+ +L +LF L+  +   G SLN+L  NFF+      G ++ NS ++ KH+LDL R
Sbjct: 165 ENQLPWFVLNRLFELSDTYDSEGRSLNQLAENFFHHSALRPGWIRVNSGLQNKHLLDLQR 224

Query: 182 NHLLPKAQHDMEYGDYPFWEYTHSATDLWETGVKFRKKNVADGLLDITFTDDGILEIPP 358
           N +L K+   ++ G  P        T+L   G+ F      D L+ ITF  +G+L IPP
Sbjct: 225 NIILLKSNESVDGGILPI----PCVTELLLAGIDF-AVGETDDLMKITF-KNGVLTIPP 277


>ref|XP_002534054.1| conserved hypothetical protein [Ricinus communis]
           gi|223525925|gb|EEF28332.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 419

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
 Frame = +2

Query: 2   ENQLPFVILEKLFYLTKDHSRRGHSLNELLTNFFNPILPTMGPVQTNSHIKGKHILDLLR 181
           ENQLP+ +L+ LF ++   +  G SL +L  NFF+ I+P          +  KH+LDLLR
Sbjct: 161 ENQLPYFVLQCLFNISSVFNG-GPSLIDLALNFFSDIIPGHKKFPQEMGVDIKHLLDLLR 219

Query: 182 NHLLPKAQHDMEYGDYPFWEYTHSATDL-WETGVKFRKKNVADGLLDITFTDDGILEIP 355
           +   P    +  + + P     HSATDL  +  +KFR    A  LLDI F  +G++EIP
Sbjct: 220 HSYAPSWIDEHAFDNEP-EVLIHSATDLKIKAAIKFRTAGRAKSLLDIKFHSNGLMEIP 277


>ref|XP_002336282.1| predicted protein [Populus trichocarpa] gi|222833691|gb|EEE72168.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
 Frame = +2

Query: 2   ENQLPFVILEKLFYLTKDHSRRG--HSLNELLTNFFNPILPTMGPV-QTNSHIKGKHILD 172
           ENQ+PF +LE LF  +   SR+    SL EL   FF+        V +    I+G+H+LD
Sbjct: 100 ENQIPFFVLETLFETSILSSRKQIVSSLTELALKFFDHAAERPPEVLRRYKDIRGEHLLD 159

Query: 173 LLRNHLLPKAQHDMEYGDYPFWEYTHSATDLWETGVKFRKKNVADGLLDITFTDDGILEI 352
           L R+ ++P +  ++     PF +  HSA  L + G+KF+ +   D  LDI F+ +G+LEI
Sbjct: 160 LFRSTIIPASSQEVHRKISPF-QLIHSAKKLHQAGIKFKPRE-TDSFLDIEFS-NGVLEI 216

Query: 353 P 355
           P
Sbjct: 217 P 217


>ref|XP_002335272.1| predicted protein [Populus trichocarpa] gi|222833186|gb|EEE71663.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
 Frame = +2

Query: 2   ENQLPFVILEKLFYLTKDHSRRG--HSLNELLTNFFNPILPTMGPV-QTNSHIKGKHILD 172
           ENQ+PF +LE LF  +   SR+    SL EL   FF+        V +    I+G+H+LD
Sbjct: 193 ENQIPFFVLETLFETSILSSRKQIVSSLTELALKFFDHAAERPPEVLRRYKDIRGEHLLD 252

Query: 173 LLRNHLLPKAQHDMEYGDYPFWEYTHSATDLWETGVKFRKKNVADGLLDITFTDDGILEI 352
           L R+ ++P +  ++     PF +  HSA  L + G+KF+ +   D  LDI F+ +G+LEI
Sbjct: 253 LFRSTIIPASSQEVHRKISPF-QLIHSAKKLHQAGIKFKPRE-TDSFLDIEFS-NGVLEI 309

Query: 353 P 355
           P
Sbjct: 310 P 310


Top