BLASTX nr result

ID: Coptis23_contig00040253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040253
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512056.1| conserved hypothetical protein [Ricinus comm...   184   7e-45
emb|CBI27315.3| unnamed protein product [Vitis vinifera]              179   2e-43
ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268...   179   2e-43
ref|XP_002312290.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42
ref|XP_003628745.1| hypothetical protein MTR_8g066290 [Medicago ...   168   5e-40

>ref|XP_002512056.1| conserved hypothetical protein [Ricinus communis]
           gi|223549236|gb|EEF50725.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1246

 Score =  184 bits (467), Expect = 7e-45
 Identities = 85/120 (70%), Positives = 98/120 (81%)
 Frame = +2

Query: 14  DGLEIISIGKLYKGSTWDKKYWSSSRGKDRYPYPVGYHAVRTQNGTTYKMEISQGLKGPS 193
           +GLE++SIG LY G  WDKKYWSSSRGKDRYPYPVGY A R  +G+TYKMEI +G KGP 
Sbjct: 15  NGLELVSIGSLYTG-IWDKKYWSSSRGKDRYPYPVGYQARRAYHGSTYKMEIQEGPKGPL 73

Query: 194 FVITSTDGESCSGQTPDMAWDKFQKNTSPRLKLGHAKRFSCKIDGVEIFGFRNALVQRLL 373
           F+ITS  G SCSGQTPD+AW+KFQK    R+K+ H KR+SCKIDG+E FGFRN LVQRLL
Sbjct: 74  FLITSAGGHSCSGQTPDIAWEKFQKKGCSRMKIWHGKRYSCKIDGIEFFGFRNPLVQRLL 133


>emb|CBI27315.3| unnamed protein product [Vitis vinifera]
          Length = 1177

 Score =  179 bits (455), Expect = 2e-43
 Identities = 88/120 (73%), Positives = 93/120 (77%)
 Frame = +2

Query: 14  DGLEIISIGKLYKGSTWDKKYWSSSRGKDRYPYPVGYHAVRTQNGTTYKMEISQGLKGPS 193
           D LEI SIG L+KG  WDKKYWSSSRGKDRYPYPVGY A+RT NG  YKMEI +G KGP 
Sbjct: 10  DDLEITSIGALHKGP-WDKKYWSSSRGKDRYPYPVGYQALRTHNGIRYKMEIHEGPKGPL 68

Query: 194 FVITSTDGESCSGQTPDMAWDKFQKNTSPRLKLGHAKRFSCKIDGVEIFGFRNALVQRLL 373
           FVI S DG  CSGQTPD+AW+ FQK   PRLK  H KR SCKIDGVE FGFRN  VQRLL
Sbjct: 69  FVIISADGILCSGQTPDIAWEIFQKKGCPRLKTLHGKRLSCKIDGVEFFGFRNPFVQRLL 128


>ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268093 [Vitis vinifera]
          Length = 1242

 Score =  179 bits (455), Expect = 2e-43
 Identities = 88/120 (73%), Positives = 93/120 (77%)
 Frame = +2

Query: 14  DGLEIISIGKLYKGSTWDKKYWSSSRGKDRYPYPVGYHAVRTQNGTTYKMEISQGLKGPS 193
           D LEI SIG L+KG  WDKKYWSSSRGKDRYPYPVGY A+RT NG  YKMEI +G KGP 
Sbjct: 10  DDLEITSIGALHKGP-WDKKYWSSSRGKDRYPYPVGYQALRTHNGIRYKMEIHEGPKGPL 68

Query: 194 FVITSTDGESCSGQTPDMAWDKFQKNTSPRLKLGHAKRFSCKIDGVEIFGFRNALVQRLL 373
           FVI S DG  CSGQTPD+AW+ FQK   PRLK  H KR SCKIDGVE FGFRN  VQRLL
Sbjct: 69  FVIISADGILCSGQTPDIAWEIFQKKGCPRLKTLHGKRLSCKIDGVEFFGFRNPFVQRLL 128


>ref|XP_002312290.1| predicted protein [Populus trichocarpa] gi|222852110|gb|EEE89657.1|
           predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  175 bits (444), Expect = 3e-42
 Identities = 84/137 (61%), Positives = 92/137 (67%), Gaps = 18/137 (13%)
 Frame = +2

Query: 17  GLEIISIGKLYKGSTWDKKYWSSSRGKDRYPYPVGYHAVRTQNGTTYKMEISQGLKGPSF 196
           GLE++SIG LY G  WDKKYWSS+RGKDRYPYPVGY A R  NG  YKMEI +G KGP F
Sbjct: 21  GLELVSIGSLYSGGAWDKKYWSSTRGKDRYPYPVGYQARRAYNGGAYKMEIHEGPKGPLF 80

Query: 197 V------------------ITSTDGESCSGQTPDMAWDKFQKNTSPRLKLGHAKRFSCKI 322
                              ITSTDG SCSGQTPD+ W KFQKN  P  K+ H KRFSC I
Sbjct: 81  ALVLRKGRKIRMTNTVLLQITSTDGYSCSGQTPDIVWQKFQKNCCPHTKIWHGKRFSCMI 140

Query: 323 DGVEIFGFRNALVQRLL 373
           DG+E FGF+N  VQRLL
Sbjct: 141 DGIEFFGFKNPFVQRLL 157


>ref|XP_003628745.1| hypothetical protein MTR_8g066290 [Medicago truncatula]
           gi|355522767|gb|AET03221.1| hypothetical protein
           MTR_8g066290 [Medicago truncatula]
          Length = 1244

 Score =  168 bits (425), Expect = 5e-40
 Identities = 78/120 (65%), Positives = 93/120 (77%)
 Frame = +2

Query: 14  DGLEIISIGKLYKGSTWDKKYWSSSRGKDRYPYPVGYHAVRTQNGTTYKMEISQGLKGPS 193
           D LE+ISIG LY G  WDKKYWSSSRGKDRYPYPVGY AVR  NGTTYKMEI +G  GP 
Sbjct: 24  DNLEVISIGSLYNGP-WDKKYWSSSRGKDRYPYPVGYQAVRAHNGTTYKMEILEGDNGPK 82

Query: 194 FVITSTDGESCSGQTPDMAWDKFQKNTSPRLKLGHAKRFSCKIDGVEIFGFRNALVQRLL 373
           F+I+S DG S +G+TPD AW++FQK    R+K+ H KR S K+ G+E+FGF+N  +QRLL
Sbjct: 83  FLISSDDGNSATGKTPDSAWEEFQKKGYNRMKIWHGKRLSSKMYGLELFGFKNQFIQRLL 142


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