BLASTX nr result

ID: Coptis23_contig00040213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040213
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...    95   2e-20

>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score = 95.1 bits (235), Expect(2) = 2e-20
 Identities = 46/53 (86%), Positives = 49/53 (92%)
 Frame = +2

Query: 128 SMLHESAAFSGVLSHSCPPRSATRSVVLSHKISTPPACWPGESKLSAGQLSTQ 286
           +ML+ESAAFS V SHSCPPR ATRSVVLSHKISTPPA WPGESKLS+GQLSTQ
Sbjct: 193 AMLNESAAFSVVFSHSCPPRRATRSVVLSHKISTPPASWPGESKLSSGQLSTQ 245



 Score = 28.9 bits (63), Expect(2) = 2e-20
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +1

Query: 31  VPLRLRPIFPNRARAGLRA 87
           VP R+    PNRARAGLRA
Sbjct: 175 VPFRIAANLPNRARAGLRA 193


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