BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040200
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520265.1| pentatricopeptide repeat-containing protein,...   203   1e-50
ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat...   201   4e-50
ref|XP_002302206.1| predicted protein [Populus trichocarpa] gi|2...   199   3e-49
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]   198   4e-49
ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat...   191   4e-47

>ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540484|gb|EEF42051.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 681

 Score =  203 bits (516), Expect = 1e-50
 Identities = 95/141 (67%), Positives = 118/141 (83%)
 Frame = +1

Query: 7   PNDITFTAVLSACNHSGLVEEGRKWFYSMKSDYNMEPAIEHYSCMIDLCARAGYLEKAMD 186
           P DITFT VLSAC+H GLVEEGRKWF  MK DY+++P IEHYSCM+DL ARAG L++A++
Sbjct: 536 PTDITFTGVLSACDHCGLVEEGRKWFNIMKYDYHIDPGIEHYSCMVDLFARAGCLKEALN 595

Query: 187 LIDQMPFEADASMWSSVVRGCAAHGDEILGRKVAECIIQLDPENSSAYVQLASIHASSGS 366
           L++ MPFEAD SMWSSV+RGC AHGD+ LG+KVA+ IIQL+PE+SSAYVQL+ I A+SG 
Sbjct: 596 LVEHMPFEADCSMWSSVLRGCVAHGDKDLGKKVAQQIIQLNPESSSAYVQLSGIFATSGD 655

Query: 367 WERSAEVRKSMQGNRIRKNPG 429
           WE SA VRK M   +++K+PG
Sbjct: 656 WESSALVRKIMTEKQVKKHPG 676


>ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like [Vitis vinifera]
          Length = 685

 Score =  201 bits (512), Expect = 4e-50
 Identities = 96/141 (68%), Positives = 113/141 (80%)
 Frame = +1

Query: 7   PNDITFTAVLSACNHSGLVEEGRKWFYSMKSDYNMEPAIEHYSCMIDLCARAGYLEKAMD 186
           P DITF  VLSAC+H GLVEEGRKWFY+MK DY++ P IEHYSCM+DL ARAG LE AM+
Sbjct: 536 PTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMN 595

Query: 187 LIDQMPFEADASMWSSVVRGCAAHGDEILGRKVAECIIQLDPENSSAYVQLASIHASSGS 366
           LI+QMP +AD SMWSSV+RGC AHG+ ILG+KVA+ II LDPENS AYVQL+ I+A+   
Sbjct: 596 LIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFED 655

Query: 367 WERSAEVRKSMQGNRIRKNPG 429
           W RSA+VRK M   +I K PG
Sbjct: 656 WGRSAQVRKLMYDKKIPKVPG 676


>ref|XP_002302206.1| predicted protein [Populus trichocarpa] gi|222843932|gb|EEE81479.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score =  199 bits (505), Expect = 3e-49
 Identities = 95/141 (67%), Positives = 117/141 (82%)
 Frame = +1

Query: 7   PNDITFTAVLSACNHSGLVEEGRKWFYSMKSDYNMEPAIEHYSCMIDLCARAGYLEKAMD 186
           P +ITFT VLSAC+H GLV+EG +WF  M+ DY+++P IEHYSCM+DL ARAG LE+AM+
Sbjct: 535 PTEITFTGVLSACDHCGLVKEGWRWFNIMQYDYHIDPGIEHYSCMVDLFARAGCLEEAMN 594

Query: 187 LIDQMPFEADASMWSSVVRGCAAHGDEILGRKVAECIIQLDPENSSAYVQLASIHASSGS 366
           LI +MPFEADASMWSSV+RGC AHG++ LG KVA+ II+LDPENS AYVQL+SI A+SG 
Sbjct: 595 LIKRMPFEADASMWSSVLRGCMAHGEKDLGEKVAQQIIELDPENSGAYVQLSSIFATSGD 654

Query: 367 WERSAEVRKSMQGNRIRKNPG 429
           WE SA VRK MQ  +++K PG
Sbjct: 655 WESSALVRKVMQERQVQKYPG 675


>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
          Length = 1796

 Score =  198 bits (503), Expect = 4e-49
 Identities = 94/139 (67%), Positives = 112/139 (80%)
 Frame = +1

Query: 7   PNDITFTAVLSACNHSGLVEEGRKWFYSMKSDYNMEPAIEHYSCMIDLCARAGYLEKAMD 186
           P DITF  VLSAC+H GLVEEGRKWFY+MK DY++ P IEHYSCM+DL ARAG LE AM+
Sbjct: 536 PTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMN 595

Query: 187 LIDQMPFEADASMWSSVVRGCAAHGDEILGRKVAECIIQLDPENSSAYVQLASIHASSGS 366
           LI+QMP +AD SMWSSV+RGC AHG+ ILG+KVA+ II LDPENS AYVQL+ I+A+   
Sbjct: 596 LIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFED 655

Query: 367 WERSAEVRKSMQGNRIRKN 423
           W RSA+VRK M   +I K+
Sbjct: 656 WGRSAQVRKLMYDKKIPKD 674



 Score =  121 bits (303), Expect = 7e-26
 Identities = 55/138 (39%), Positives = 88/138 (63%)
 Frame = +1

Query: 7    PNDITFTAVLSACNHSGLVEEGRKWFYSMKSDYNMEPAIEHYSCMIDLCARAGYLEKAMD 186
            P++IT   VL ACN  GLV+EG   F SM+ +Y + PAIEHY+C++D+ +R G L++AMD
Sbjct: 1141 PDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMD 1200

Query: 187  LIDQMPFEADASMWSSVVRGCAAHGDEILGRKVAECIIQLDPENSSAYVQLASIHASSGS 366
            +++ MP E    +W S++  C  +GD     +VAE +++L+P++S  Y+ LA  +   G 
Sbjct: 1201 IVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGR 1260

Query: 367  WERSAEVRKSMQGNRIRK 420
            WE    V ++M+   +RK
Sbjct: 1261 WESLVRVXRAMKEKGVRK 1278


>ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like [Glycine max]
          Length = 678

 Score =  191 bits (486), Expect = 4e-47
 Identities = 89/143 (62%), Positives = 115/143 (80%)
 Frame = +1

Query: 1   ICPNDITFTAVLSACNHSGLVEEGRKWFYSMKSDYNMEPAIEHYSCMIDLCARAGYLEKA 180
           + P+ ITFT VLSAC+HSGLVEEGR  F++MK  YN+ P IEH+SCM+DL ARAGY E+A
Sbjct: 530 VWPSAITFTGVLSACDHSGLVEEGRNLFHTMKHSYNINPGIEHFSCMVDLFARAGYFEEA 589

Query: 181 MDLIDQMPFEADASMWSSVVRGCAAHGDEILGRKVAECIIQLDPENSSAYVQLASIHASS 360
           MDLI++MPF+ADA+MW SV+RGC AHG++ +G+  AE IIQL+PEN+ AY+QL++I ASS
Sbjct: 590 MDLIEEMPFQADANMWLSVLRGCIAHGNKTIGKMAAEQIIQLEPENTGAYIQLSNILASS 649

Query: 361 GSWERSAEVRKSMQGNRIRKNPG 429
           G WE SA VR+ M+    +K PG
Sbjct: 650 GDWEGSALVRELMRDKHFQKIPG 672