BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040190
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group]        134   1e-29
emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]                130   1e-28
emb|CAE03018.3| OSJNBa0091D06.3 [Oryza sativa Japonica Group]         130   1e-28
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]      129   2e-28
emb|CAE05274.1| OSJNBb0014D23.8 [Oryza sativa Japonica Group]         128   4e-28

>emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group]
          Length = 1817

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/100 (65%), Positives = 83/100 (83%)
 Frame = +2

Query: 2    LKERQAMVEVIKDDLYKAQERMKFYADKKRTERSFVIGDLVYLKLQPY*QTSVALRKNLK 181
            LKERQ M ++++  L++AQ++MK +ADKKR+ R+F IGD VYLKLQPY QTSVA+R N K
Sbjct: 1437 LKERQLMQKLVQQHLHRAQQQMKHFADKKRSFRTFAIGDWVYLKLQPYVQTSVAVRANHK 1496

Query: 182  LSAKFYGPFQVLARIGVVAYKLQLPIGSKIHPMFHVSQLK 301
            L+ K++GPFQ+ A+IG VAYKLQLP  S IHP+FHVSQLK
Sbjct: 1497 LAFKYFGPFQITAQIGTVAYKLQLPPTSSIHPVFHVSQLK 1536


>emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]
          Length = 642

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/100 (62%), Positives = 82/100 (82%)
 Frame = +2

Query: 2   LKERQAMVEVIKDDLYKAQERMKFYADKKRTERSFVIGDLVYLKLQPY*QTSVALRKNLK 181
           LKER+ M  +++  L++AQ++MK +ADKKR+ RSF +GD VYLKLQPY QTSVA+R N K
Sbjct: 385 LKERRLMQNLVQQHLHRAQQQMKHFADKKRSFRSFEVGDWVYLKLQPYVQTSVAVRANHK 444

Query: 182 LSAKFYGPFQVLARIGVVAYKLQLPIGSKIHPMFHVSQLK 301
           L+ K++GP+QV A+IG VAY+LQLP  + IHP+FHVSQLK
Sbjct: 445 LAFKYFGPYQVTAKIGTVAYQLQLPSSTSIHPVFHVSQLK 484


>emb|CAE03018.3| OSJNBa0091D06.3 [Oryza sativa Japonica Group]
          Length = 753

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/100 (62%), Positives = 82/100 (82%)
 Frame = +2

Query: 2   LKERQAMVEVIKDDLYKAQERMKFYADKKRTERSFVIGDLVYLKLQPY*QTSVALRKNLK 181
           LKER+ M  +++  L++AQ++MK +ADKKR+ RSF +GD VYLKLQPY QTSVA+R N K
Sbjct: 273 LKERRLMQNLVQQHLHRAQQQMKHFADKKRSFRSFEVGDWVYLKLQPYVQTSVAVRANHK 332

Query: 182 LSAKFYGPFQVLARIGVVAYKLQLPIGSKIHPMFHVSQLK 301
           L+ K++GP+QV A+IG VAY+LQLP  + IHP+FHVSQLK
Sbjct: 333 LAFKYFGPYQVTAKIGTVAYQLQLPSSTSIHPVFHVSQLK 372


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/100 (65%), Positives = 79/100 (79%)
 Frame = +2

Query: 2    LKERQAMVEVIKDDLYKAQERMKFYADKKRTERSFVIGDLVYLKLQPY*QTSVALRKNLK 181
            LKER+ M +VIK  L++AQ+RMK  ADK+R+ER F +GD VYLKLQPY Q+SVA R N K
Sbjct: 1369 LKERELMTKVIKLHLHRAQDRMKRQADKQRSERVFSVGDWVYLKLQPYIQSSVATRSNHK 1428

Query: 182  LSAKFYGPFQVLARIGVVAYKLQLPIGSKIHPMFHVSQLK 301
            LS KF+GPFQ+  R+G VAY+L LP  S IHP+FHVSQLK
Sbjct: 1429 LSFKFFGPFQITDRLGSVAYRLALPASSSIHPIFHVSQLK 1468


>emb|CAE05274.1| OSJNBb0014D23.8 [Oryza sativa Japonica Group]
          Length = 1545

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/100 (61%), Positives = 79/100 (79%)
 Frame = +2

Query: 2    LKERQAMVEVIKDDLYKAQERMKFYADKKRTERSFVIGDLVYLKLQPY*QTSVALRKNLK 181
            L ER+ M +++K  L +AQ++MK YADKKR+ R FV+GD VYLKLQPY Q+SVA R N K
Sbjct: 810  LSERKLMTQLLKQHLIRAQQQMKVYADKKRSFREFVVGDWVYLKLQPYIQSSVARRANHK 869

Query: 182  LSAKFYGPFQVLARIGVVAYKLQLPIGSKIHPMFHVSQLK 301
            L  K++GPFQ+L ++G VAY+LQLP  S +HP+FHVSQLK
Sbjct: 870  LCFKYFGPFQILHKVGKVAYQLQLPANSAVHPVFHVSQLK 909