BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040139
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...   149   3e-34
ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|2...   147   9e-34
emb|CBI27232.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,...   139   3e-31

>ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|222842032|gb|EEE79579.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/124 (58%), Positives = 98/124 (79%)
 Frame = +1

Query: 43  HKNEDEDDYITESQQPLAPEIFRSCPKLGSYKQGDSTFYSLIENFASLGDFTSLERVLDR 222
           H+N  + ++  E   P++ +IF+S PK+GSYK GDSTFYSLI+N+A+LGDF SLE+VLDR
Sbjct: 26  HRNASDREHGIEHDPPISDKIFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDR 85

Query: 223 MKREQRVFNEKIFILMFKAYGKAHLCDKVLSLFDTMVEEFGCRQTIRSFNSVLNVLIQER 402
           M+ E+RV  EK F+++FKAYGKAHL +K + LFD M  EF C++T++SFNSVLNV+IQE 
Sbjct: 86  MRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEG 145

Query: 403 CYDR 414
            + R
Sbjct: 146 LFYR 149


>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/113 (63%), Positives = 91/113 (80%)
 Frame = +1

Query: 76  ESQQPLAPEIFRSCPKLGSYKQGDSTFYSLIENFASLGDFTSLERVLDRMKREQRVFNEK 255
           ES  P+  +IF+S  ++GSYK GDSTFYSLIEN+A+ GDF +L +V DRMKRE+RVF EK
Sbjct: 41  ESDAPIPDQIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEK 100

Query: 256 IFILMFKAYGKAHLCDKVLSLFDTMVEEFGCRQTIRSFNSVLNVLIQERCYDR 414
            FIL+F+AYGKAHL +K + LF  MV+EF CR+T+RSFNSVLNV+IQE  + R
Sbjct: 101 NFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHR 153


>ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|222845175|gb|EEE82722.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/125 (58%), Positives = 95/125 (76%)
 Frame = +1

Query: 40  KHKNEDEDDYITESQQPLAPEIFRSCPKLGSYKQGDSTFYSLIENFASLGDFTSLERVLD 219
           +H N  + +   E   P++ +IF+S PK+GSY+ GDSTFYSLI N+A+LGDF SLE+VLD
Sbjct: 55  QHCNTTDQENGIEPDPPISDKIFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLD 114

Query: 220 RMKREQRVFNEKIFILMFKAYGKAHLCDKVLSLFDTMVEEFGCRQTIRSFNSVLNVLIQE 399
           RMK E+RV  EK FI++FKAYGKAHL +K + LFD M  EF C++T +SFNSVLNV+IQE
Sbjct: 115 RMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQE 174

Query: 400 RCYDR 414
             + R
Sbjct: 175 GLFHR 179


>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  142 bits (358), Expect = 3e-32
 Identities = 69/104 (66%), Positives = 86/104 (82%)
 Frame = +1

Query: 103 IFRSCPKLGSYKQGDSTFYSLIENFASLGDFTSLERVLDRMKREQRVFNEKIFILMFKAY 282
           IF+S  ++GSYK GDSTFYSLIEN+A+ GDF +L +V DRMKRE+RVF EK FIL+F+AY
Sbjct: 66  IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAY 125

Query: 283 GKAHLCDKVLSLFDTMVEEFGCRQTIRSFNSVLNVLIQERCYDR 414
           GKAHL +K + LF  MV+EF CR+T+RSFNSVLNV+IQE  + R
Sbjct: 126 GKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHR 169


>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/124 (55%), Positives = 91/124 (73%)
 Frame = +1

Query: 43  HKNEDEDDYITESQQPLAPEIFRSCPKLGSYKQGDSTFYSLIENFASLGDFTSLERVLDR 222
           ++N D ++       P++ +IF S PK+GS+K GDSTFYSLIEN+A   DF SLE+VL+R
Sbjct: 38  NQNNDLENGSEPESSPISDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNR 97

Query: 223 MKREQRVFNEKIFILMFKAYGKAHLCDKVLSLFDTMVEEFGCRQTIRSFNSVLNVLIQER 402
           M+ E RVF+EK F +MFKAYGKAHL +K + LF  M  EF C+ T++SFNSVLNV+IQ  
Sbjct: 98  MRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAG 157

Query: 403 CYDR 414
            +DR
Sbjct: 158 FHDR 161