BLASTX nr result

ID: Coptis23_contig00040114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040114
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515995.1| hypothetical protein RCOM_1491960 [Ricinus c...    87   2e-15
emb|CBI38948.3| unnamed protein product [Vitis vinifera]               86   4e-15
emb|CBI36098.3| unnamed protein product [Vitis vinifera]               82   6e-14
ref|XP_002277853.2| PREDICTED: probable disease resistance prote...    71   1e-10
emb|CBI36043.3| unnamed protein product [Vitis vinifera]               68   7e-10

>ref|XP_002515995.1| hypothetical protein RCOM_1491960 [Ricinus communis]
           gi|223544900|gb|EEF46415.1| hypothetical protein
           RCOM_1491960 [Ricinus communis]
          Length = 740

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 37/163 (22%)
 Frame = -2

Query: 380 TICLDDYLAAYYRSGELLKHAD------------------------RFVPQQIMR---IQ 282
           T+CL+DY A Y RS EL K AD                        +  P ++MR   +Q
Sbjct: 500 TVCLEDYRAVYDRSCELRKIADGGTSDHTLSAGTRATNKLPVALEVQQKPSELMRQGCLQ 559

Query: 281 VTPQHKSKLG---------IDVVRILKFP-FSAQIKPICASIFKKYRKKLITTSCDILLG 132
           +  Q  +KL           +VV + + P  S     +  S+ K+Y  KL +TS D+ +G
Sbjct: 560 IKSQEGTKLRKEQAGSSAVTEVVSVAEVPETSTNSSSLHQSLLKRYGVKLASTSSDVWMG 619

Query: 131 TRLLFIDMSTATSLLLKHIRGHKVTEREMKKLKRTLVDFATVI 3
           T+LLF+D+     LLLK +RGHKV+ RE +KLKRTL D AT+I
Sbjct: 620 TQLLFVDIIDTMELLLKQMRGHKVSRRERRKLKRTLNDIATLI 662


>emb|CBI38948.3| unnamed protein product [Vitis vinifera]
          Length = 426

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 55/146 (37%), Positives = 84/146 (57%), Gaps = 20/146 (13%)
 Frame = -2

Query: 380 TICLDDYLAAYYRSG---------ELLKHADR--FVPQQIMRIQVTP---------QHKS 261
           T CL+DY AAY RSG         +L K A+R  F P Q +  + T          Q + 
Sbjct: 210 TSCLEDYWAAYNRSGYDNADFSSSQLQKIAERNAFDPTQSIGTKSTTSSSLTLEAQQKQG 269

Query: 260 KLGIDVVRILKFPFSAQIKPICASIFKKYRKKLITTSCDILLGTRLLFIDMSTATSLLLK 81
            +G +   +++   + + + +  ++ +K   KLI+TS DI +GT+LLFID+  +  LLLK
Sbjct: 270 MMGTETRTLVEAGRTVESEALHQNLLRKSSMKLISTSSDIWMGTQLLFIDIMASLELLLK 329

Query: 80  HIRGHKVTEREMKKLKRTLVDFATVI 3
            +RG ++TERE  KLK+TLVD A++I
Sbjct: 330 QMRGRRITERERNKLKQTLVDIASLI 355


>emb|CBI36098.3| unnamed protein product [Vitis vinifera]
          Length = 510

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 31/157 (19%)
 Frame = -2

Query: 380 TICLDDYLAAYYRSG---------ELLKHADRFVPQQIMR----------IQVTPQHKS- 261
           T CL+DY AAY RSG         +L K A+R    Q             + +  Q K+ 
Sbjct: 285 TSCLEDYWAAYDRSGYDNADFSSSQLQKIAERNALDQTQSSGTKDTTSSSVTLDAQQKAT 344

Query: 260 -----------KLGIDVVRILKFPFSAQIKPICASIFKKYRKKLITTSCDILLGTRLLFI 114
                      K+G +   +++   +A+ + +  ++ +K   KLI+TS DI +GT+LLFI
Sbjct: 345 ITIICCWQASCKVGTETRTLVEAGRTAESEALHQNLLRKSSMKLISTSSDIWMGTQLLFI 404

Query: 113 DMSTATSLLLKHIRGHKVTEREMKKLKRTLVDFATVI 3
           D+  +  LLLK +RG +VTERE KKLK+TL D A++I
Sbjct: 405 DIMASLELLLKQMRGRRVTERERKKLKQTLADIASLI 441


>ref|XP_002277853.2| PREDICTED: probable disease resistance protein At5g63020-like [Vitis
            vinifera]
          Length = 1639

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/97 (37%), Positives = 62/97 (63%)
 Frame = -2

Query: 293  MRIQVTPQHKSKLGIDVVRILKFPFSAQIKPICASIFKKYRKKLITTSCDILLGTRLLFI 114
            + ++   +   K+G +   +++   +A+ + +   + +K   KLI+TS DI +GT+LLFI
Sbjct: 1477 LTLEAQQKASCKVGTETRTLVEAGRTAESEALHQILLRKSSMKLISTSSDIWMGTQLLFI 1536

Query: 113  DMSTATSLLLKHIRGHKVTEREMKKLKRTLVDFATVI 3
            D+  +  LLLK +RG ++TERE KKLK+TL   A++I
Sbjct: 1537 DIMASLELLLKQMRGRRITERERKKLKQTLAGIASLI 1573


>emb|CBI36043.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/72 (47%), Positives = 51/72 (70%)
 Frame = -2

Query: 218 SAQIKPICASIFKKYRKKLITTSCDILLGTRLLFIDMSTATSLLLKHIRGHKVTEREMKK 39
           +A+ + +   + +K   KLI+TS DI +GT+LLFID+  +  LLLK +RG ++TERE KK
Sbjct: 21  TAESEALHQILLRKSSMKLISTSSDIWMGTQLLFIDIMASLELLLKQMRGRRITERERKK 80

Query: 38  LKRTLVDFATVI 3
           LK+TL   A++I
Sbjct: 81  LKQTLAGIASLI 92


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