BLASTX nr result

ID: Coptis23_contig00040085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040085
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30554.3| unnamed protein product [Vitis vinifera]              152   3e-35
ref|XP_002270472.1| PREDICTED: uncharacterized protein LOC100256...   152   3e-35
ref|XP_002308158.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
emb|CAD98760.1| MYB transcription factor R3 type [Populus tremul...   137   7e-31
ref|XP_003551473.1| PREDICTED: uncharacterized protein LOC778081...   135   5e-30

>emb|CBI30554.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/106 (70%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
 Frame = +1

Query: 1   WTLEEELSLMNAQRTYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGRLPPVP 180
           WTL+EEL+LMNA   +GNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATG+LPPV 
Sbjct: 168 WTLDEELALMNAHSKHGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGKLPPVV 227

Query: 181 KTGI-TGTKDTSRLMATGQISGWSNRGSDSTDQQVVETEGLCKLDE 315
           K+G   G KDT+R  A G++ G SN+GS+ST Q    T  LCKL+E
Sbjct: 228 KSGFQNGAKDTNRTNAPGKLLGCSNKGSESTAQTSSGTTDLCKLEE 273


>ref|XP_002270472.1| PREDICTED: uncharacterized protein LOC100256181 [Vitis vinifera]
          Length = 558

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/106 (70%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
 Frame = +1

Query: 1   WTLEEELSLMNAQRTYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGRLPPVP 180
           WTL+EEL+LMNA   +GNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATG+LPPV 
Sbjct: 168 WTLDEELALMNAHSKHGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGKLPPVV 227

Query: 181 KTGI-TGTKDTSRLMATGQISGWSNRGSDSTDQQVVETEGLCKLDE 315
           K+G   G KDT+R  A G++ G SN+GS+ST Q    T  LCKL+E
Sbjct: 228 KSGFQNGAKDTNRTNAPGKLLGCSNKGSESTAQTSSGTTDLCKLEE 273


>ref|XP_002308158.1| predicted protein [Populus trichocarpa] gi|222854134|gb|EEE91681.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  137 bits (346), Expect = 7e-31
 Identities = 70/106 (66%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
 Frame = +1

Query: 1   WTLEEELSLMNAQRTYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGRLPPVP 180
           WTLEEEL+LMNA R YGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYL+TG+LPP+ 
Sbjct: 167 WTLEEELALMNAHRIYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLSTGKLPPIS 226

Query: 181 KTGI-TGTKDTSRLMATGQISGWSNRGSDSTDQQVVETEGLCKLDE 315
           K G   GTKDT++      +     + SDS  Q    T  +CKLDE
Sbjct: 227 KNGFQNGTKDTNKSAVMKTM-----KESDSAAQTSSGTTDICKLDE 267


>emb|CAD98760.1| MYB transcription factor R3 type [Populus tremula x Populus
           tremuloides]
          Length = 530

 Score =  137 bits (346), Expect = 7e-31
 Identities = 70/106 (66%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
 Frame = +1

Query: 1   WTLEEELSLMNAQRTYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGRLPPVP 180
           WTLEEEL+LMNA R YGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYL+TG+LPP+ 
Sbjct: 167 WTLEEELALMNAHRIYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLSTGKLPPIS 226

Query: 181 KTGI-TGTKDTSRLMATGQISGWSNRGSDSTDQQVVETEGLCKLDE 315
           K G   GTKDT++      +     + SDS  Q    T  +CKLDE
Sbjct: 227 KNGFQNGTKDTNKSAVMKTM-----KESDSAAQTSSGTTDICKLDE 267


>ref|XP_003551473.1| PREDICTED: uncharacterized protein LOC778081 [Glycine max]
          Length = 572

 Score =  135 bits (339), Expect = 5e-30
 Identities = 69/106 (65%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
 Frame = +1

Query: 1   WTLEEELSLMNAQRTYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGRLPPVP 180
           WTLEEELSLMNA R +GNKWAEIAKVL GRTDN+IKNHWNSSLKKKLDFYLATGRLPP+P
Sbjct: 180 WTLEEELSLMNAHRIHGNKWAEIAKVLHGRTDNAIKNHWNSSLKKKLDFYLATGRLPPIP 239

Query: 181 KTG-ITGTKDTSRLMATGQISGWSNRGSDSTDQQVVETEGLCKLDE 315
           K       KDT R  A+  I G SN+  ++  +   ET  + KLD+
Sbjct: 240 KNSPQVPVKDTIRRSASKSILGCSNKELNAAVETSSETTSISKLDD 285


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