BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040055
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16268.3| unnamed protein product [Vitis vinifera]              298   4e-79
ref|XP_002284901.1| PREDICTED: uncharacterized protein LOC100258...   298   4e-79
dbj|BAF02599.1| RNA ligase isoform 2 [Triticum aestivum]              297   8e-79
dbj|BAF02600.1| RNA ligase isoform 3 [Triticum aestivum]              296   2e-78
dbj|BAF02598.1| RNA ligase isoform 1 [Triticum aestivum]              294   7e-78

>emb|CBI16268.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score =  298 bits (764), Expect = 4e-79
 Identities = 147/198 (74%), Positives = 171/198 (86%)
 Frame = -1

Query: 594 AYEKQVEFNDFLEENRVCVAMELVTAVLGDHGQRPLEDYVVVTAVTELGEGKPVFYSTPD 415
           A +KQVEFNDF+E NR+ ++MELVTAVLGDHGQRP EDYVVVTAVTELG GKP FYSTPD
Sbjct: 117 ARKKQVEFNDFIERNRISISMELVTAVLGDHGQRPQEDYVVVTAVTELGNGKPKFYSTPD 176

Query: 414 IIAFCRKWRLPTNHVWLLSTRKAVTSFFAAYDALYEEGTATPVCRVLDEVADISVAGSIE 235
           IIAFCR+WRLPTNHVWLLSTRK+VTSFFAAYDAL EEGTATPVC+ LDEVADISV GS +
Sbjct: 177 IIAFCREWRLPTNHVWLLSTRKSVTSFFAAYDALCEEGTATPVCKALDEVADISVPGSKD 236

Query: 234 HVKMQGEILEGLVVRVVSRKSLKHMKKVLKRYPLPALGGVDHDVMGMSLRIICAADWSDQ 55
           HVK+QGEILEGLV R+VS +S KH++KVL+ +P P       D +G SLR ICAA+ SD+
Sbjct: 237 HVKVQGEILEGLVARIVSHESSKHLEKVLRDFPPPPSEAAGSD-LGPSLREICAANRSDE 295

Query: 54  KEQIRALLQSVGTSLCPD 1
           K+QI+ALL+S+G+S CPD
Sbjct: 296 KQQIKALLESIGSSFCPD 313


>ref|XP_002284901.1| PREDICTED: uncharacterized protein LOC100258617 [Vitis vinifera]
          Length = 1165

 Score =  298 bits (764), Expect = 4e-79
 Identities = 147/198 (74%), Positives = 171/198 (86%)
 Frame = -1

Query: 594 AYEKQVEFNDFLEENRVCVAMELVTAVLGDHGQRPLEDYVVVTAVTELGEGKPVFYSTPD 415
           A +KQVEFNDF+E NR+ ++MELVTAVLGDHGQRP EDYVVVTAVTELG GKP FYSTPD
Sbjct: 253 ARKKQVEFNDFIERNRISISMELVTAVLGDHGQRPQEDYVVVTAVTELGNGKPKFYSTPD 312

Query: 414 IIAFCRKWRLPTNHVWLLSTRKAVTSFFAAYDALYEEGTATPVCRVLDEVADISVAGSIE 235
           IIAFCR+WRLPTNHVWLLSTRK+VTSFFAAYDAL EEGTATPVC+ LDEVADISV GS +
Sbjct: 313 IIAFCREWRLPTNHVWLLSTRKSVTSFFAAYDALCEEGTATPVCKALDEVADISVPGSKD 372

Query: 234 HVKMQGEILEGLVVRVVSRKSLKHMKKVLKRYPLPALGGVDHDVMGMSLRIICAADWSDQ 55
           HVK+QGEILEGLV R+VS +S KH++KVL+ +P P       D +G SLR ICAA+ SD+
Sbjct: 373 HVKVQGEILEGLVARIVSHESSKHLEKVLRDFPPPPSEAAGSD-LGPSLREICAANRSDE 431

Query: 54  KEQIRALLQSVGTSLCPD 1
           K+QI+ALL+S+G+S CPD
Sbjct: 432 KQQIKALLESIGSSFCPD 449


>dbj|BAF02599.1| RNA ligase isoform 2 [Triticum aestivum]
          Length = 1034

 Score =  297 bits (761), Expect = 8e-79
 Identities = 142/200 (71%), Positives = 174/200 (87%)
 Frame = -1

Query: 600 AEAYEKQVEFNDFLEENRVCVAMELVTAVLGDHGQRPLEDYVVVTAVTELGEGKPVFYST 421
           ++A + Q EFNDFLEENR+C++MELVTAVLGDHGQRP +DY VVTAVTELG GKP FYST
Sbjct: 118 SKAPKMQAEFNDFLEENRICISMELVTAVLGDHGQRPKDDYAVVTAVTELGHGKPQFYST 177

Query: 420 PDIIAFCRKWRLPTNHVWLLSTRKAVTSFFAAYDALYEEGTATPVCRVLDEVADISVAGS 241
           P++I+FCRKWRLPTNHVWL STRK+ TSFFAAYDAL EEGTATPVC+ LDE+ADISV GS
Sbjct: 178 PEVISFCRKWRLPTNHVWLFSTRKSATSFFAAYDALCEEGTATPVCKALDEIADISVPGS 237

Query: 240 IEHVKMQGEILEGLVVRVVSRKSLKHMKKVLKRYPLPALGGVDHDVMGMSLRIICAADWS 61
            +HV +QGEILEGLV R+VSR+S   M++VL+ +P+P+L G D D +G SLR ICAA+ S
Sbjct: 238 KDHVMVQGEILEGLVARIVSRESSVQMEEVLRNFPIPSLDGGDSD-LGPSLRDICAANRS 296

Query: 60  DQKEQIRALLQSVGTSLCPD 1
           D+K+QI+ALL++VG+S+CPD
Sbjct: 297 DEKQQIKALLENVGSSMCPD 316


>dbj|BAF02600.1| RNA ligase isoform 3 [Triticum aestivum]
          Length = 1044

 Score =  296 bits (757), Expect = 2e-78
 Identities = 141/200 (70%), Positives = 174/200 (87%)
 Frame = -1

Query: 600 AEAYEKQVEFNDFLEENRVCVAMELVTAVLGDHGQRPLEDYVVVTAVTELGEGKPVFYST 421
           ++A + Q EFNDFLE+NR+C++MELVTAVLGDHGQRP +DY VVTAVTELG GKP FYST
Sbjct: 128 SKAPKMQAEFNDFLEKNRICISMELVTAVLGDHGQRPKDDYAVVTAVTELGHGKPQFYST 187

Query: 420 PDIIAFCRKWRLPTNHVWLLSTRKAVTSFFAAYDALYEEGTATPVCRVLDEVADISVAGS 241
           P++I+FCRKWRLPTNHVWL STRK+ TSFFAAYDAL EEGTATPVC+ LDE+ADISV GS
Sbjct: 188 PEVISFCRKWRLPTNHVWLFSTRKSATSFFAAYDALCEEGTATPVCKALDEIADISVPGS 247

Query: 240 IEHVKMQGEILEGLVVRVVSRKSLKHMKKVLKRYPLPALGGVDHDVMGMSLRIICAADWS 61
            +HV +QGEILEGLV R+VSR+S   M++VL+ +P+P+L G D D +G SLR ICAA+ S
Sbjct: 248 KDHVMVQGEILEGLVARIVSRESSVQMEEVLRNFPIPSLDGGDSD-LGPSLRDICAANRS 306

Query: 60  DQKEQIRALLQSVGTSLCPD 1
           D+K+QI+ALL++VG+S+CPD
Sbjct: 307 DEKQQIKALLENVGSSMCPD 326


>dbj|BAF02598.1| RNA ligase isoform 1 [Triticum aestivum]
          Length = 1116

 Score =  294 bits (753), Expect = 7e-78
 Identities = 140/199 (70%), Positives = 173/199 (86%)
 Frame = -1

Query: 597 EAYEKQVEFNDFLEENRVCVAMELVTAVLGDHGQRPLEDYVVVTAVTELGEGKPVFYSTP 418
           +A + Q EFNDFLE+NR+C++MELVTAVLGDHGQRP +DY VVTAVTELG GKP FYSTP
Sbjct: 201 KAPKMQAEFNDFLEKNRICISMELVTAVLGDHGQRPKDDYAVVTAVTELGHGKPQFYSTP 260

Query: 417 DIIAFCRKWRLPTNHVWLLSTRKAVTSFFAAYDALYEEGTATPVCRVLDEVADISVAGSI 238
           ++I+FCRKWRLPTNHVWL STRK+ TSFFAAYDAL EEGTATPVC+ LDE+ADISV GS 
Sbjct: 261 EVISFCRKWRLPTNHVWLFSTRKSATSFFAAYDALCEEGTATPVCKALDEIADISVPGSK 320

Query: 237 EHVKMQGEILEGLVVRVVSRKSLKHMKKVLKRYPLPALGGVDHDVMGMSLRIICAADWSD 58
           +HV +QGEILEGLV R+VSR+S   M++VL+ +P+P+L G D D +G SLR ICAA+ SD
Sbjct: 321 DHVMVQGEILEGLVARIVSRESSVQMEEVLRNFPIPSLDGGDSD-LGPSLRDICAANRSD 379

Query: 57  QKEQIRALLQSVGTSLCPD 1
           +K+QI++LL++VG+S+CPD
Sbjct: 380 EKQQIKSLLENVGSSMCPD 398