BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040007
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containi...   156   1e-36
ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
ref|XP_002513633.1| pentatricopeptide repeat-containing protein,...   146   2e-33
ref|XP_002305943.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
ref|XP_003592182.1| Pentatricopeptide repeat-containing protein ...   136   2e-30

>ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
           gi|302143764|emb|CBI22625.3| unnamed protein product
           [Vitis vinifera]
          Length = 880

 Score =  156 bits (395), Expect = 1e-36
 Identities = 79/142 (55%), Positives = 100/142 (70%)
 Frame = -1

Query: 429 LEWDLSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAF 250
           LE D+S G+ LVDMYMKCS M++DA  AF+ I SPNVI WTSLI+GF++HG+E E+ + F
Sbjct: 348 LENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVF 407

Query: 249 LEMQIAGTQPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSRL 70
             MQ  G +PNS T++ IL  C T  +  + RKLH   IK   D D ++GNALVD Y+ L
Sbjct: 408 GAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGL 467

Query: 69  EMVEDAWKVIKMMTNRDVITYT 4
            MV+DAW V  MM +RDVITYT
Sbjct: 468 GMVDDAWHVTSMMKHRDVITYT 489



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 50/143 (34%), Positives = 83/143 (58%), Gaps = 1/143 (0%)
 Frame = -1

Query: 429 LEWDLSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAF 250
           +E +L   + LVDMY KC + ++DA    K  +  +V  WT++ISGF Q     EA  AF
Sbjct: 247 IELNLVLKTALVDMYCKC-QSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAF 305

Query: 249 LEMQIAGTQPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSRL 70
            EM+ +G  PN+ T +GIL  C +  A    +++H+  +    + D  +GN+LVD+Y + 
Sbjct: 306 HEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKC 365

Query: 69  -EMVEDAWKVIKMMTNRDVITYT 4
             M+EDA +  + + + +VI++T
Sbjct: 366 SNMIEDAVRAFRGIASPNVISWT 388



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/140 (30%), Positives = 74/140 (52%)
 Frame = -1

Query: 420 DLSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAFLEM 241
           D+   + L+ +Y KC   V +A   F ++   +V  WT L+S + + G   EA + F  M
Sbjct: 49  DMFLSNNLLSLYGKCFG-VAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSM 107

Query: 240 QIAGTQPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSRLEMV 61
            I+G  PN  T++  L+ C          +  AL  K   D + +LG+AL+D YS+    
Sbjct: 108 LISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCT 167

Query: 60  EDAWKVIKMMTNRDVITYTI 1
           ++A++V + M N D++++T+
Sbjct: 168 QEAYRVFEYMNNGDIVSWTM 187



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 40/135 (29%), Positives = 68/135 (50%)
 Frame = -1

Query: 408 GSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAFLEMQIAG 229
           GS L+D Y KC    ++A   F+ + + +++ WT ++S F + G   +A Q +  M   G
Sbjct: 154 GSALIDFYSKCG-CTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTG 212

Query: 228 TQPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSRLEMVEDAW 49
             PN  T   +L      G     + +HA  +  + + + +L  ALVD+Y + + +EDA 
Sbjct: 213 VAPNEFTFVKLLAASSFLGL-NYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAV 271

Query: 48  KVIKMMTNRDVITYT 4
           KV K+    DV  +T
Sbjct: 272 KVSKLTLEYDVFLWT 286



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
 Frame = -1

Query: 417 LSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAFLEMQ 238
           +S  +GLVD+Y KC   + DA  +F +I  P+ + W  LI G A +G    A  AF +M+
Sbjct: 555 ISVSNGLVDLYGKCG-CIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMR 613

Query: 237 IAGTQPNSITIAGILKGCVTAGAP-------RKVRKLHALSIKVKEDFDTILGNALVDVY 79
           +AG +P+ IT   +L  C   G         + +R+ H     ++   D  +   LVD+ 
Sbjct: 614 LAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHG----IRPQLDHYV--CLVDLL 667

Query: 78  SRLEMVEDAWKVIKMM 31
            R   +E+A  VI+ M
Sbjct: 668 GRAGRLEEAMNVIETM 683


>ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/142 (52%), Positives = 93/142 (65%)
 Frame = -1

Query: 429 LEWDLSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAF 250
           LE D+  G+ LVDMYMKCS    +   AF+ I  PNVI WTSLI+GFA+HG E E+ Q F
Sbjct: 351 LEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLF 410

Query: 249 LEMQIAGTQPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSRL 70
            EMQ AG QPNS T++ IL  C    +  + +KLH   IK + D D  +GNALVD Y+  
Sbjct: 411 AEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGG 470

Query: 69  EMVEDAWKVIKMMTNRDVITYT 4
            M ++AW VI MM +RD+ITYT
Sbjct: 471 GMADEAWSVIGMMNHRDIITYT 492



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/142 (28%), Positives = 75/142 (52%)
 Frame = -1

Query: 429 LEWDLSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAF 250
           L+ DL   + L+ +Y KC   V  A   F ++   +V+ WT+L+S   ++    EA Q F
Sbjct: 47  LQHDLYLSNNLLCLYAKCFG-VGQARHLFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLF 105

Query: 249 LEMQIAGTQPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSRL 70
             M  +G  PN  T++  L+ C   G      K+HA  +K+  + + +LG  LVD+Y++ 
Sbjct: 106 DMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKC 165

Query: 69  EMVEDAWKVIKMMTNRDVITYT 4
           +   +  K++  + + DV+++T
Sbjct: 166 DCTVEPHKLLAFVKDGDVVSWT 187



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 40/119 (33%), Positives = 65/119 (54%)
 Frame = -1

Query: 429 LEWDLSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAF 250
           +E +L   + ++ MY KC  M +DA    +Q    +V  WTS+ISGF Q+    EA  A 
Sbjct: 250 VEMNLMLKTAIICMYAKCRRM-EDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNAL 308

Query: 249 LEMQIAGTQPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSR 73
           ++M+++G  PN+ T A +L    +  +     + H+  I V  + D  +GNALVD+Y +
Sbjct: 309 VDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMK 367



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/77 (38%), Positives = 45/77 (58%)
 Frame = -1

Query: 414 SAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAFLEMQI 235
           S  + LV  Y KC  M +DA   FK I  P+ + W  LISG A +G+  +A  AF +M++
Sbjct: 559 SVSNSLVHSYSKCGSM-RDAYRVFKDITEPDRVSWNGLISGLASNGLISDALSAFDDMRL 617

Query: 234 AGTQPNSITIAGILKGC 184
           AG +P+S+T   ++  C
Sbjct: 618 AGVKPDSVTFLSLIFAC 634



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
 Frame = -1

Query: 429 LEWDLSAGSGLVDMYMKCSEMVKDASL-AFKQIISPNVICWTSLISGFAQHGVECEAFQA 253
           LE +   G+ LVD+Y KC   V+   L AF  +   +V+ WT++IS   +     EA Q 
Sbjct: 148 LELNHVLGTTLVDLYTKCDCTVEPHKLLAF--VKDGDVVSWTTMISSLVETSKWSEALQL 205

Query: 252 FLEMQIAGTQPNSITIAGILKGCVTAGAPRKVRK-LHALSIKVKEDFDTILGNALVDVYS 76
           +++M  AG  PN  T   +L      G  +   K LH+  I    + + +L  A++ +Y+
Sbjct: 206 YVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYA 265

Query: 75  RLEMVEDAWKVIKMMTNRDVITYT 4
           +   +EDA KV +     DV  +T
Sbjct: 266 KCRRMEDAIKVSQQTPKYDVCLWT 289


>ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547541|gb|EEF49036.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 777

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/142 (50%), Positives = 96/142 (67%)
 Frame = -1

Query: 429 LEWDLSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAF 250
           LE D+  G+ LVDMYMKCS +V+     F+ I SPNVI WTSLI+GFA+HG + ++   F
Sbjct: 352 LEDDVPVGNALVDMYMKCSCIVEHGLRMFRGIKSPNVISWTSLIAGFAEHGFQQDSLNLF 411

Query: 249 LEMQIAGTQPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSRL 70
           +EM+  G QPNS T++ +L+ C    +P +  KLH   IK K D+D ++GNALVD Y+  
Sbjct: 412 MEMRTVGVQPNSFTLSIVLRVCSAIKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGS 471

Query: 69  EMVEDAWKVIKMMTNRDVITYT 4
             V+DAW+V+K M  RD ITYT
Sbjct: 472 GRVDDAWRVVKDMNQRDSITYT 493



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 45/142 (31%), Positives = 78/142 (54%)
 Frame = -1

Query: 429 LEWDLSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAF 250
           L+  L   + L+ +Y KC   V+ A   F ++   +V+ WT ++S   ++    EA   F
Sbjct: 50  LQDHLYLNNNLLSLYSKCFS-VEHARQFFDEMPCRDVVSWTGILSAHIKNERHEEALDIF 108

Query: 249 LEMQIAGTQPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSRL 70
             M ++G  PN+ T + IL+ C   G     +++HA SIK   + + ILG++L+D+YSR 
Sbjct: 109 DFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIHASSIKHGFESNQILGSSLIDLYSRF 168

Query: 69  EMVEDAWKVIKMMTNRDVITYT 4
           +  EDA K+   M + D +++T
Sbjct: 169 DSTEDACKLFSYMDSGDTVSWT 190



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/135 (31%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
 Frame = -1

Query: 405 SGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAFLEMQIAGT 226
           + LV+MY +C + ++DA    K     +VI WT++ISG AQ+    EA  AF +M+I+G 
Sbjct: 259 TALVNMYSRC-QRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEISGV 317

Query: 225 QPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSRLE-MVEDAW 49
             ++ T   +L  C++  +    R++H+  I+   + D  +GNALVD+Y +   +VE   
Sbjct: 318 SASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGL 377

Query: 48  KVIKMMTNRDVITYT 4
           ++ + + + +VI++T
Sbjct: 378 RMFRGIKSPNVISWT 392



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
 Frame = -1

Query: 417 LSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAFLEMQ 238
           LS  +GL+D+Y K   +V +A  AF +I  P+V+ W  LISG A +G    A  AF +M+
Sbjct: 559 LSVANGLIDLYGKYG-LVHEARRAFTEITEPDVVSWNGLISGLASNGHISSALSAFDDMR 617

Query: 237 IAGTQPNSITIAGILKGCVTAGAP-------RKVRKLHALSIKVKEDFDTILGNALVDVY 79
           + G QP+SIT   +L  C   G           +R++H   ++ + D        LVD+ 
Sbjct: 618 LRGIQPDSITFLLVLSTCSHGGLVDMGLQYFHSMREMH--DVEPQSDHYV----CLVDIL 671

Query: 78  SRLEMVEDAWKVIKMM 31
            R   +E+A  +I+ M
Sbjct: 672 GRAGRLEEAMNIIETM 687



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
 Frame = -1

Query: 408 GSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAFLEMQIAG 229
           GS L+D+Y +  +  +DA   F  + S + + WT++I+   Q G    A + ++EM  A 
Sbjct: 158 GSSLIDLYSRF-DSTEDACKLFSYMDSGDTVSWTTVIASCVQAGKCSHALRIYMEMLEAQ 216

Query: 228 TQPNSITIAGILKGCVTAGAPR-KVRKLHALSIKVKEDFDTILGNALVDVYSRLEMVEDA 52
              N  T   +L      G    K+   HA+ + VK   + +L  ALV++YSR + +EDA
Sbjct: 217 VSSNEFTFVRLLAASSFIGLQYGKLIHAHAIVLGVK--LNLVLKTALVNMYSRCQRIEDA 274

Query: 51  WKVIKMMTNRDVITYT 4
            KV K+    DVI +T
Sbjct: 275 IKVSKLTPEYDVILWT 290


>ref|XP_002305943.1| predicted protein [Populus trichocarpa] gi|222848907|gb|EEE86454.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score =  137 bits (345), Expect = 9e-31
 Identities = 67/142 (47%), Positives = 94/142 (66%)
 Frame = -1

Query: 429 LEWDLSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAF 250
           LE D+  G+ LVDMYMKCS  V+D    F+ I SP+VI WTSLI+G ++HG    +F ++
Sbjct: 273 LEDDIPVGNALVDMYMKCSHEVEDGLRVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSY 332

Query: 249 LEMQIAGTQPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSRL 70
           +EM  +G QPNS+T++ IL+ C  A +  ++ KLH   IK   D D  + NALVD Y+  
Sbjct: 333 MEMTASGLQPNSVTLSIILRSCRAAKSASQLLKLHGHVIKTNADHDIAVSNALVDAYAGN 392

Query: 69  EMVEDAWKVIKMMTNRDVITYT 4
           E V+DAW +I+ M+ RD +TYT
Sbjct: 393 ERVDDAWHLIRNMSQRDALTYT 414



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 50/143 (34%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
 Frame = -1

Query: 429 LEWDLSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAF 250
           +E +L   + LV MY KC  M  DA    K     +   WT+++SG AQ+    EA  AF
Sbjct: 172 VELNLVVKTALVHMYSKCQRM-DDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAF 230

Query: 249 LEMQIAGTQPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSRL 70
            EM+ +G   N+ T   IL  C    +    R++HA  I    + D  +GNALVD+Y + 
Sbjct: 231 QEMEASGILSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKC 290

Query: 69  -EMVEDAWKVIKMMTNRDVITYT 4
              VED  +V + + + DVI++T
Sbjct: 291 SHEVEDGLRVFEGIESPDVISWT 313



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/109 (31%), Positives = 60/109 (55%)
 Frame = -1

Query: 330 SPNVICWTSLISGFAQHGVECEAFQAFLEMQIAGTQPNSITIAGILKGCVTAGAPRKVRK 151
           S +V+ WT ++S + +H    EA   F EM  +G  PN  T + +L+ C   G     + 
Sbjct: 3   SRDVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDGKC 62

Query: 150 LHALSIKVKEDFDTILGNALVDVYSRLEMVEDAWKVIKMMTNRDVITYT 4
           +H   IK   + + ILG+ L+D+YS+   +E+A ++   + N DV+++T
Sbjct: 63  IHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWT 111



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/135 (27%), Positives = 70/135 (51%)
 Frame = -1

Query: 408 GSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAFLEMQIAG 229
           GS L+D+Y K    +++A   F  + + +V+ WT++IS   Q G   +A + +++M  AG
Sbjct: 79  GSVLIDLYSKYGS-IEEACRLFSCVENGDVVSWTTMISSLVQAGKWSQALRIYIDMIKAG 137

Query: 228 TQPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSRLEMVEDAW 49
             PN  T   +L      G  +  + +HA  I    + + ++  ALV +YS+ + ++DA 
Sbjct: 138 VYPNEFTFVKVLAAAGFLGL-KHGKVVHAHLIVFGVELNLVVKTALVHMYSKCQRMDDAV 196

Query: 48  KVIKMMTNRDVITYT 4
           ++ K+    D   +T
Sbjct: 197 RISKLTPESDRFLWT 211



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
 Frame = -1

Query: 417 LSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAFLEMQ 238
           +S  +GLV  Y KC  + +DA  AF +I  P+++ W  LIS  A +G    A  AF +M+
Sbjct: 480 ISVSNGLVSFYGKCG-LTRDAERAFAEIREPDIVSWNGLISVLASYGHISSALSAFDDMR 538

Query: 237 IAGTQPNSITIAGILKGCVTAGAP-------RKVRKLHALSIKVKEDFDTILGNALVDVY 79
           + G +P+S+T   +L  C   G           ++++H +  ++           L D+ 
Sbjct: 539 LTGVKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKEMHGIEPQLDHYV------CLFDLL 592

Query: 78  SRLEMVEDAWKVIKMMTNR 22
            R   +E+A ++++ M  R
Sbjct: 593 GRAGRLEEAMEILETMPIR 611


>ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355481230|gb|AES62433.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/142 (50%), Positives = 92/142 (64%)
 Frame = -1

Query: 429 LEWDLSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAF 250
           LE DL  G+ LVDMYMKCS +  +A   F++I SPNV+CWTSLI+GFA+  +E ++FQ F
Sbjct: 350 LEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRLE-DSFQLF 408

Query: 249 LEMQIAGTQPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSRL 70
            EMQ AG +PNS T++ IL  C    +      LH   IK K D D  + NALVD Y+ +
Sbjct: 409 AEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGV 468

Query: 69  EMVEDAWKVIKMMTNRDVITYT 4
            M+++AW VI  M  RD ITYT
Sbjct: 469 GMIDEAWSVIGTMNLRDSITYT 490



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
 Frame = -1

Query: 426 EWDLSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAFL 247
           E +L   + +VDMY KC  MV DA          +V  WT+LISGF Q+    EA   F 
Sbjct: 250 ELNLVLKTAVVDMYSKCRRMV-DAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFR 308

Query: 246 EMQIAGTQPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSRL- 70
           +M+++G  PN+ T + +L    +  +     + H+  I V  + D  +GNALVD+Y +  
Sbjct: 309 DMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCS 368

Query: 69  EMVEDAWKVIKMMTNRDVITYT 4
            +  +A KV + +T+ +V+ +T
Sbjct: 369 HITTNAVKVFREITSPNVMCWT 390



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
 Frame = -1

Query: 414 SAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAFLEMQI 235
           S  + LV +Y KC   + DA+ AFK I  P+   W  LISGF+ +G+   A   F +M++
Sbjct: 557 SVSNSLVHLYSKCGS-IHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRL 615

Query: 234 AGTQPNSITIAGILKGCVTAG-APRKVRKLHAL--SIKVKEDFDTILGNALVDVYSRLEM 64
           AG +P+SIT+  ++  C   G     +   H++     +    D  +   LVD+  R   
Sbjct: 616 AGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYM--CLVDLLGRGGR 673

Query: 63  VEDAWKVIKMMT 28
           +E+A  VI+ M+
Sbjct: 674 LEEAMGVIEKMS 685



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
 Frame = -1

Query: 429 LEWDLSAGSGLVDMYMKCS----------EMVKDASLAFKQIISPNVICWTSLISGFAQH 280
           LE +   G+ LV+ Y KC            +VKD           +V+ WT+++S   ++
Sbjct: 146 LEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGG---------DVVSWTTMLSSLVEN 196

Query: 279 GVECEAFQAFLEMQIAGTQPNSITIAGILKGCVTAGAPRKVRK-LHALSIKVKEDFDTIL 103
           G   EAF+ +++M  +G  PN  T   +L G V++       K LHA  I    + + +L
Sbjct: 197 GKWGEAFEIYVKMIESGVYPNEFTFVKLL-GAVSSFLGLSYGKLLHAHLIMFGAELNLVL 255

Query: 102 GNALVDVYSRLEMVEDAWKVIKMMTNRDVITYT 4
             A+VD+YS+   + DA KV  +    DV  +T
Sbjct: 256 KTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWT 288



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/144 (24%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
 Frame = -1

Query: 429 LEWDLSAGSGLVDMYMKCSEMVKDASLAFKQIISPNVICWTSLISGFAQHGVECEAFQAF 250
           L+ DL   + L+ +Y K   + +   L F ++ + +V+ WT+++S   +     +A Q F
Sbjct: 45  LQHDLYLTNNLLSLYAKTFGVHRARHL-FDEMPNRDVVSWTTILSSHTKTKHHSDALQLF 103

Query: 249 LEMQIAGTQPNSITIAGILKGCVTAGAPRKVRKLHALSIKVKEDFDTILGNALVDVYSRL 70
             M  +G  PN  T++  L+ C   G   +  ++H  ++K+  + +  +G +LV+ Y++ 
Sbjct: 104 DMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKC 163

Query: 69  EMVE-DAWKVIKMMTN-RDVITYT 4
                +AWK++ ++ +  DV+++T
Sbjct: 164 GCCSVEAWKLLSLVKDGGDVVSWT 187