BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039376
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW55712.1| ribosomal protein L16 [Lonicera sp. Bergthorsson ...   171   4e-41
dbj|BAD83475.2| ribosomal protein L16, partial (mitochondrion) [...   171   4e-41
gb|AEN56098.1| ribosomal protein L16 [Cucumis melo subsp. melo]       170   1e-40
ref|YP_004849332.1| ribosomal protein L16 [Cucumis sativus] gi|3...   170   1e-40
ref|YP_005090456.1| ribosomal protein L16 (mitochondrion) [Mille...   169   3e-40

>gb|AAW55712.1| ribosomal protein L16 [Lonicera sp. Bergthorsson 0301]
          Length = 160

 Score =  171 bits (434), Expect = 4e-41
 Identities = 81/94 (86%), Positives = 81/94 (86%)
 Frame = +1

Query: 1   PKRTKYSKYRKGRCSRGCKPDGTQLGFGRYGIQSCRAGRLSYXXXXXXXXXXXGQFHRAM 180
           PKRTKYSKYRKGRCSRGCKPDGTQLGFGRYG QSCRAGRLSY           GQFHRAM
Sbjct: 24  PKRTKYSKYRKGRCSRGCKPDGTQLGFGRYGTQSCRAGRLSYRAIEAARRAIIGQFHRAM 83

Query: 181 SGQFRRNGKIWVRVFADLPITGKPTEVRMGRGKG 282
           SGQFRRNGKIWVRV ADLPITGKPTEVRMGRGKG
Sbjct: 84  SGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKG 117


>dbj|BAD83475.2| ribosomal protein L16, partial (mitochondrion) [Nicotiana tabacum]
          Length = 158

 Score =  171 bits (434), Expect = 4e-41
 Identities = 80/94 (85%), Positives = 82/94 (87%)
 Frame = +1

Query: 1   PKRTKYSKYRKGRCSRGCKPDGTQLGFGRYGIQSCRAGRLSYXXXXXXXXXXXGQFHRAM 180
           PKRTKYSKYRKGRCSRGCKPDGTQLGFGRYGI+SCRAGRLSY           G FHRAM
Sbjct: 18  PKRTKYSKYRKGRCSRGCKPDGTQLGFGRYGIKSCRAGRLSYRAIEAARRAIIGHFHRAM 77

Query: 181 SGQFRRNGKIWVRVFADLPITGKPTEVRMGRGKG 282
           SGQFRRNGKIWVRVFAD+PITGKPTEVRMGRGKG
Sbjct: 78  SGQFRRNGKIWVRVFADIPITGKPTEVRMGRGKG 111


>gb|AEN56098.1| ribosomal protein L16 [Cucumis melo subsp. melo]
          Length = 144

 Score =  170 bits (430), Expect = 1e-40
 Identities = 80/94 (85%), Positives = 81/94 (86%)
 Frame = +1

Query: 1   PKRTKYSKYRKGRCSRGCKPDGTQLGFGRYGIQSCRAGRLSYXXXXXXXXXXXGQFHRAM 180
           PKRTKYSKYRKGRCSRGCKPDGTQLGFGRYG QSCRAGRLSY           GQFHRAM
Sbjct: 4   PKRTKYSKYRKGRCSRGCKPDGTQLGFGRYGTQSCRAGRLSYRAIEAARRAIIGQFHRAM 63

Query: 181 SGQFRRNGKIWVRVFADLPITGKPTEVRMGRGKG 282
           SGQFRRNG+IWVRV ADLPITGKPTEVRMGRGKG
Sbjct: 64  SGQFRRNGQIWVRVLADLPITGKPTEVRMGRGKG 97


>ref|YP_004849332.1| ribosomal protein L16 [Cucumis sativus] gi|325305590|gb|ADZ10759.1|
           ribosomal protein L16 [Cucumis sativus]
          Length = 144

 Score =  170 bits (430), Expect = 1e-40
 Identities = 80/94 (85%), Positives = 81/94 (86%)
 Frame = +1

Query: 1   PKRTKYSKYRKGRCSRGCKPDGTQLGFGRYGIQSCRAGRLSYXXXXXXXXXXXGQFHRAM 180
           PKRTKYSKYRKGRCSRGCKPDGTQLGFGRYG QSCRAGRLSY           GQFHRAM
Sbjct: 4   PKRTKYSKYRKGRCSRGCKPDGTQLGFGRYGTQSCRAGRLSYRAIEAARRAMSGQFHRAM 63

Query: 181 SGQFRRNGKIWVRVFADLPITGKPTEVRMGRGKG 282
           SGQFRRNG+IWVRV ADLPITGKPTEVRMGRGKG
Sbjct: 64  SGQFRRNGQIWVRVLADLPITGKPTEVRMGRGKG 97


>ref|YP_005090456.1| ribosomal protein L16 (mitochondrion) [Millettia pinnata]
           gi|358748147|gb|AET62916.1| ribosomal protein L16
           (mitochondrion) [Millettia pinnata]
          Length = 185

 Score =  169 bits (427), Expect = 3e-40
 Identities = 78/94 (82%), Positives = 82/94 (87%)
 Frame = +1

Query: 1   PKRTKYSKYRKGRCSRGCKPDGTQLGFGRYGIQSCRAGRLSYXXXXXXXXXXXGQFHRAM 180
           PKRTK+SKYRKGRCSRGCKPDGT+LGFGRYGIQSCRAGRLSY           G FHRAM
Sbjct: 45  PKRTKFSKYRKGRCSRGCKPDGTKLGFGRYGIQSCRAGRLSYRAIEAARRAIIGHFHRAM 104

Query: 181 SGQFRRNGKIWVRVFADLPITGKPTEVRMGRGKG 282
           SGQFR+NGKIWVRVFAD+PITGKPTEVRMGRGKG
Sbjct: 105 SGQFRKNGKIWVRVFADIPITGKPTEVRMGRGKG 138