BLASTX nr result

ID: Coptis23_contig00039259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039259
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334072.1| cc-nbs-lrr resistance protein [Populus trich...    91   1e-16
ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002301713.1| nbs-lrr resistance protein [Populus trichoca...    82   6e-14
ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002301715.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13

>ref|XP_002334072.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222839772|gb|EEE78095.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1005

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/130 (41%), Positives = 82/130 (63%), Gaps = 8/130 (6%)
 Frame = +3

Query: 6    CPKLT-LPMLPLSIEELAVERCNDPTLGSVGNLPHLSFLKIGGFDEVDRLPEAPLRNLTC 182
            CPKL  LP++P S++ L +E C    L SV N   +++L+I GFDE+  LP+  L+N TC
Sbjct: 824  CPKLVELPIIP-SVKHLTIEDCTVTLLRSVVNFTSITYLRIEGFDELAVLPDGLLQNHTC 882

Query: 183  LQKL-VIKNCNLKILPTRLENLATLRFMRIINCDELDNMTE------GLQSLTSLEELWL 341
            LQKL + K  +L+ L  +L NL++L+ + I+NCD+L++  E       ++ LTSL  L +
Sbjct: 883  LQKLSITKMRSLRSLSNQLNNLSSLKHLVIMNCDKLESFPEVSCLPNQIRHLTSLSRLHI 942

Query: 342  GNCRSLKSLP 371
              C +L SLP
Sbjct: 943  HGCSNLMSLP 952


>ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|222844717|gb|EEE82264.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 47/124 (37%), Positives = 80/124 (64%), Gaps = 2/124 (1%)
 Frame = +3

Query: 6   CPKLT-LPMLPLSIEELAVERCNDPTLGSVGNLPHLSFLKIGGFDEVDRLPEAPLRNLTC 182
           CPKL  LP++P S+++L +  C+   L SV N   ++ L+I GFDE+  LP+  L+N TC
Sbjct: 211 CPKLVELPIIP-SVKDLTIGDCSVTLLRSVVNFSSMTSLQIEGFDELTVLPDGLLQNHTC 269

Query: 183 LQKLVIKNC-NLKILPTRLENLATLRFMRIINCDELDNMTEGLQSLTSLEELWLGNCRSL 359
           LQ L  +   +L+ L  +L NL++L+ +  + C++L+++ EG+Q+L SLE L++     +
Sbjct: 270 LQSLTFQGMGSLRSLSNQLNNLSSLKRLGFLLCEKLESLPEGVQNLNSLEMLFIYGMPKI 329

Query: 360 KSLP 371
            +LP
Sbjct: 330 TTLP 333


>ref|XP_002301713.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222843439|gb|EEE80986.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1109

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/124 (39%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
 Frame = +3

Query: 6    CPKLT-LPMLPLSIEELAVERCNDPTLGSVGNLPHLSFLKIGGFDEVDRLPEAPLRNLTC 182
            C KL  LP +P S+  L ++  +  +L SV N   L+ L+I  F ++  LP   ++N   
Sbjct: 870  CAKLVDLPAIP-SVRTLKIKNSSTASLLSVRNFTSLTSLRIEDFCDLTHLPGGMVKNHAV 928

Query: 183  LQKL-VIKNCNLKILPTRLENLATLRFMRIINCDELDNMTEGLQSLTSLEELWLGNCRSL 359
            L +L +++  NLK L  +L+NL  L+ + +I CDEL+++ EGLQ+L SLE L + +C  L
Sbjct: 929  LGRLEIVRLRNLKSLSNQLDNLFALKRLFLIECDELESLPEGLQNLNSLESLHINSCGGL 988

Query: 360  KSLP 371
            KSLP
Sbjct: 989  KSLP 992


>ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|222834470|gb|EEE72947.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/123 (39%), Positives = 77/123 (62%), Gaps = 2/123 (1%)
 Frame = +3

Query: 6   CPKLT-LPMLPLSIEELAVERCNDPTLGSVGNLPHLSFLKIGGFDEVDRLPEAPLRNLTC 182
           CPKL  LP++P S++ L +E C    L SV N   ++ L+I GFDE+  LP+  L+N TC
Sbjct: 236 CPKLVELPIIP-SVKYLTIEDCAVTLLRSVVNFTSITSLRIEGFDELAVLPDGLLQNHTC 294

Query: 183 LQKLVIKNC-NLKILPTRLENLATLRFMRIINCDELDNMTEGLQSLTSLEELWLGNCRSL 359
           LQ L   +  +L+ L  +L NL++L+ +  + CD+L+++ EG+Q+L SLE   LG C  +
Sbjct: 295 LQSLTFGSMGSLRSLSNQLNNLSSLKSLGFLFCDKLESLPEGVQNLNSLE--MLGICAMM 352

Query: 360 KSL 368
             +
Sbjct: 353 PKM 355


>ref|XP_002301715.1| predicted protein [Populus trichocarpa] gi|222843441|gb|EEE80988.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
 Frame = +3

Query: 6   CPKLT-LPMLPLSIEELAVERCNDPTLGSVGNLPHLSFLKIGGFDEVDRLPEAPLRNLTC 182
           C KL  LP +P S+  L ++  +  +L SV N   L+ L+I  F ++  LP   ++N   
Sbjct: 351 CAKLVDLPAIP-SVRTLKIKNSSTASLLSVRNFTSLTSLRIEDFCDLTHLPGGMVKNHAV 409

Query: 183 LQKL-VIKNCNLKILPTRLENLATLRFMRIINCDELDNMTEGLQSLTSLEELWLGNCRSL 359
           L +L +++  NLK L  +L+NL  L+ +  I CDEL+++ EGLQ+L SLE L + +C  L
Sbjct: 410 LGRLEIVRLRNLKSLSNQLDNLFALKRLFFIECDELESLPEGLQNLNSLESLHINSCGGL 469

Query: 360 KSLP 371
           KSLP
Sbjct: 470 KSLP 473



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
 Frame = +3

Query: 135 DEVDRLPEAPLRNLTCLQKLVIKNCN-LKILPTR-LENLATLRFMRIINCDELDNMTEGL 308
           DE++ LPE  L+NL  L+ L I +C  LK LP   L  L +LR + ++ CD+L ++++G+
Sbjct: 443 DELESLPEG-LQNLNSLESLHINSCGGLKSLPINGLCGLHSLRRLHVLGCDKLASLSKGV 501

Query: 309 QSLTSLEELWLGNCRSLKSLP 371
           Q LT+LE L++  C  L SLP
Sbjct: 502 QYLTALEHLYIHGCSQLNSLP 522


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