BLASTX nr result

ID: Coptis23_contig00039119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039119
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888789.1| hypothetical protein ARALYDRAFT_894888 [Arab...   183   1e-44
ref|NP_177228.1| endoglucanase 8 [Arabidopsis thaliana] gi|75262...   182   3e-44
emb|CAA67156.1| endo-1,4-beta-glucanase [Arabidopsis thaliana]        182   3e-44
emb|CAA67157.1| endo-1,4-beta-glucanase [Arabidopsis thaliana]        182   3e-44
gb|AEO97194.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|...   180   1e-43

>ref|XP_002888789.1| hypothetical protein ARALYDRAFT_894888 [Arabidopsis lyrata subsp.
           lyrata] gi|297334630|gb|EFH65048.1| hypothetical protein
           ARALYDRAFT_894888 [Arabidopsis lyrata subsp. lyrata]
          Length = 492

 Score =  183 bits (465), Expect = 1e-44
 Identities = 85/95 (89%), Positives = 89/95 (93%)
 Frame = +3

Query: 3   KFGFPMAFTTTMLSWSIIDFGKTMGGELKNAVGAVKWATDYLLKVTAVPETVYVQVGDAF 182
           KFGFPMAFTTTMLSWSIIDFGKTMG ELKNAV AVKW TDYLLK TA+P  V+VQVGDA+
Sbjct: 84  KFGFPMAFTTTMLSWSIIDFGKTMGPELKNAVKAVKWGTDYLLKATAIPGVVFVQVGDAY 143

Query: 183 SDHNCWERPEDMDTLRTVYKVDRAHPGSDVAGETA 287
           SDHNCWERPEDMDTLRTVYK+DRAHPGSDVAGETA
Sbjct: 144 SDHNCWERPEDMDTLRTVYKIDRAHPGSDVAGETA 178


>ref|NP_177228.1| endoglucanase 8 [Arabidopsis thaliana]
           gi|75262268|sp|Q9CAC1.1|GUN8_ARATH RecName:
           Full=Endoglucanase 8; AltName: Full=Cellulase 1;
           Short=AtCEL1; AltName: Full=Endo-1,4-beta glucanase 8;
           Flags: Precursor gi|12324747|gb|AAG52329.1|AC011663_8
           endo-1,4-beta-glucanase; 41628-45234 [Arabidopsis
           thaliana] gi|15081781|gb|AAK82545.1| At1g70710/F5A18_11
           [Arabidopsis thaliana] gi|18377811|gb|AAL67092.1|
           At1g70710/F5A18_11 [Arabidopsis thaliana]
           gi|332196982|gb|AEE35103.1| endoglucanase 8 [Arabidopsis
           thaliana]
          Length = 492

 Score =  182 bits (462), Expect = 3e-44
 Identities = 84/95 (88%), Positives = 89/95 (93%)
 Frame = +3

Query: 3   KFGFPMAFTTTMLSWSIIDFGKTMGGELKNAVGAVKWATDYLLKVTAVPETVYVQVGDAF 182
           KFGFPMAFTTTMLSWSIIDFGKTMG EL+NAV AVKW TDYLLK TA+P  V+VQVGDA+
Sbjct: 84  KFGFPMAFTTTMLSWSIIDFGKTMGPELRNAVKAVKWGTDYLLKATAIPGVVFVQVGDAY 143

Query: 183 SDHNCWERPEDMDTLRTVYKVDRAHPGSDVAGETA 287
           SDHNCWERPEDMDTLRTVYK+DRAHPGSDVAGETA
Sbjct: 144 SDHNCWERPEDMDTLRTVYKIDRAHPGSDVAGETA 178


>emb|CAA67156.1| endo-1,4-beta-glucanase [Arabidopsis thaliana]
          Length = 493

 Score =  182 bits (462), Expect = 3e-44
 Identities = 84/95 (88%), Positives = 89/95 (93%)
 Frame = +3

Query: 3   KFGFPMAFTTTMLSWSIIDFGKTMGGELKNAVGAVKWATDYLLKVTAVPETVYVQVGDAF 182
           KFGFPMAFTTTMLSWSIIDFGKTMG EL+NAV AVKW TDYLLK TA+P  V+VQVGDA+
Sbjct: 84  KFGFPMAFTTTMLSWSIIDFGKTMGPELRNAVKAVKWGTDYLLKATAIPGVVFVQVGDAY 143

Query: 183 SDHNCWERPEDMDTLRTVYKVDRAHPGSDVAGETA 287
           SDHNCWERPEDMDTLRTVYK+DRAHPGSDVAGETA
Sbjct: 144 SDHNCWERPEDMDTLRTVYKIDRAHPGSDVAGETA 178


>emb|CAA67157.1| endo-1,4-beta-glucanase [Arabidopsis thaliana]
          Length = 492

 Score =  182 bits (462), Expect = 3e-44
 Identities = 84/95 (88%), Positives = 89/95 (93%)
 Frame = +3

Query: 3   KFGFPMAFTTTMLSWSIIDFGKTMGGELKNAVGAVKWATDYLLKVTAVPETVYVQVGDAF 182
           KFGFPMAFTTTMLSWSIIDFGKTMG EL+NAV AVKW TDYLLK TA+P  V+VQVGDA+
Sbjct: 84  KFGFPMAFTTTMLSWSIIDFGKTMGPELRNAVKAVKWGTDYLLKATAIPGVVFVQVGDAY 143

Query: 183 SDHNCWERPEDMDTLRTVYKVDRAHPGSDVAGETA 287
           SDHNCWERPEDMDTLRTVYK+DRAHPGSDVAGETA
Sbjct: 144 SDHNCWERPEDMDTLRTVYKIDRAHPGSDVAGETA 178


>gb|AEO97194.1| endo-1,4-beta-glucanase [Populus trichocarpa]
           gi|347466617|gb|AEO97221.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|429326584|gb|AFZ78632.1|
           korrigan [Populus tomentosa]
          Length = 496

 Score =  180 bits (456), Expect = 1e-43
 Identities = 83/95 (87%), Positives = 89/95 (93%)
 Frame = +3

Query: 3   KFGFPMAFTTTMLSWSIIDFGKTMGGELKNAVGAVKWATDYLLKVTAVPETVYVQVGDAF 182
           KFGFPMAFTTT+LSWSIIDFG+ MG ELKNAV AVKWATDYLLKVTAVP  VYVQ+GDA+
Sbjct: 91  KFGFPMAFTTTLLSWSIIDFGRNMGPELKNAVKAVKWATDYLLKVTAVPNVVYVQLGDAY 150

Query: 183 SDHNCWERPEDMDTLRTVYKVDRAHPGSDVAGETA 287
           SDHNCWERPEDMDTLRTVYK+D +HPGSDVAGETA
Sbjct: 151 SDHNCWERPEDMDTLRTVYKIDGSHPGSDVAGETA 185


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