BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039107
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634343.1| PREDICTED: LOW QUALITY PROTEIN: ornithine de...   244   4e-63
gb|AEQ02350.1| ornithine decarboxylase [Erythroxylum coca]            229   2e-58
gb|ABN04356.1| putative ornithine decarboxylase [Theobroma cacao]     228   3e-58
ref|XP_002307756.1| predicted protein [Populus trichocarpa] gi|2...   223   2e-56
dbj|BAK32801.1| lysine/ornithine decarboxylase [Echinosophora ko...   209   2e-52

>ref|XP_003634343.1| PREDICTED: LOW QUALITY PROTEIN: ornithine decarboxylase [Vitis
           vinifera]
          Length = 411

 Score =  244 bits (624), Expect = 4e-63
 Identities = 117/162 (72%), Positives = 137/162 (84%)
 Frame = -1

Query: 487 MGSGTTSLQTVLGAPAVKGKKVTNLSKDGLTDFILSNISSKQEVKDPFYVLDLGILVSLM 308
           MGS   SLQ +LGAP V+GK+VT LSKDGLTDF+LS IS KQE+K+PFYVLDLG++VSLM
Sbjct: 1   MGSNHKSLQAILGAPGVRGKRVTALSKDGLTDFVLSMISKKQELKEPFYVLDLGVVVSLM 60

Query: 307 EKWTRTMPIVRPFYAVKCNPEPXXXXXXXXXXXXFDCASRAEIEAVLALGVSPDRIVYAN 128
           EKW+R +P+VRPFYAVKCNP+P            FDCASR EIE VL LGVS DRI++AN
Sbjct: 61  EKWSRALPLVRPFYAVKCNPDPTFLAALAALGSSFDCASRTEIETVLGLGVSSDRIIFAN 120

Query: 127 PCKAEAHIRYAASVGVNLTTFDSREEVEKIRKWHPKCSLLIR 2
           PCKAE+HI+YAASVGVNLTTFDSR+E+EKIRK+HPKC+LLIR
Sbjct: 121 PCKAESHIKYAASVGVNLTTFDSRDEIEKIRKYHPKCALLIR 162


>gb|AEQ02350.1| ornithine decarboxylase [Erythroxylum coca]
          Length = 413

 Score =  229 bits (584), Expect = 2e-58
 Identities = 110/162 (67%), Positives = 131/162 (80%)
 Frame = -1

Query: 487 MGSGTTSLQTVLGAPAVKGKKVTNLSKDGLTDFILSNISSKQEVKDPFYVLDLGILVSLM 308
           MGS   +LQ VLGAP V+G++V  L KDGLTDF+ S I  + E K+PFYVLDLG +  LM
Sbjct: 1   MGSNARNLQAVLGAPGVRGRRVAALPKDGLTDFMQSIIMKRNESKEPFYVLDLGAVSGLM 60

Query: 307 EKWTRTMPIVRPFYAVKCNPEPXXXXXXXXXXXXFDCASRAEIEAVLALGVSPDRIVYAN 128
           +KW+RT+P+VRPFYAVKCNPEP            FDCASRAEIEAVL+L VSPDRIVYAN
Sbjct: 61  DKWSRTLPMVRPFYAVKCNPEPALLGSLAAMGANFDCASRAEIEAVLSLRVSPDRIVYAN 120

Query: 127 PCKAEAHIRYAASVGVNLTTFDSREEVEKIRKWHPKCSLLIR 2
           PCK E+HI+YAASVGVNLTTFDS++E+EK+RKWHPKC+LL+R
Sbjct: 121 PCKQESHIKYAASVGVNLTTFDSKDELEKMRKWHPKCALLLR 162


>gb|ABN04356.1| putative ornithine decarboxylase [Theobroma cacao]
          Length = 411

 Score =  228 bits (582), Expect = 3e-58
 Identities = 106/162 (65%), Positives = 134/162 (82%)
 Frame = -1

Query: 487 MGSGTTSLQTVLGAPAVKGKKVTNLSKDGLTDFILSNISSKQEVKDPFYVLDLGILVSLM 308
           MGS   +LQ ++GAP V+GKKV  LSKDGLT FI S +S+KQE+K+PFYVLDLG++++L 
Sbjct: 1   MGSSPRTLQAIVGAPGVRGKKVAALSKDGLTAFIQSIVSTKQEMKEPFYVLDLGVVMALF 60

Query: 307 EKWTRTMPIVRPFYAVKCNPEPXXXXXXXXXXXXFDCASRAEIEAVLALGVSPDRIVYAN 128
           +KW R +P+ +PFYAVKCNP P            FDCAS+AEIE+VL+LGVSP RI++AN
Sbjct: 61  DKWARNLPMAQPFYAVKCNPNPALLGALATLGSGFDCASKAEIESVLSLGVSPGRIIFAN 120

Query: 127 PCKAEAHIRYAASVGVNLTTFDSREEVEKIRKWHPKCSLLIR 2
           PCKAE+HI+YAA+VGVNLTTFDS+EE+EKI+KWHPKC+LLIR
Sbjct: 121 PCKAESHIKYAATVGVNLTTFDSKEELEKIKKWHPKCALLIR 162


>ref|XP_002307756.1| predicted protein [Populus trichocarpa] gi|222857205|gb|EEE94752.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  223 bits (567), Expect = 2e-56
 Identities = 106/152 (69%), Positives = 128/152 (84%)
 Frame = -1

Query: 457 VLGAPAVKGKKVTNLSKDGLTDFILSNISSKQEVKDPFYVLDLGILVSLMEKWTRTMPIV 278
           +LGAP VKGK+VT +SK+GLT+F+LS IS KQE K+PFYVLDLG + +LM+KW  T+P+V
Sbjct: 13  LLGAPGVKGKRVTTISKNGLTEFMLSIISKKQETKEPFYVLDLGEVTALMDKWLMTLPMV 72

Query: 277 RPFYAVKCNPEPXXXXXXXXXXXXFDCASRAEIEAVLALGVSPDRIVYANPCKAEAHIRY 98
            PFYAVKCNP+P            FDCASRAEIE+VL+LGVSP+RIVYANPCK E+HI+Y
Sbjct: 73  HPFYAVKCNPDPALLGSLAALGSNFDCASRAEIESVLSLGVSPNRIVYANPCKQESHIKY 132

Query: 97  AASVGVNLTTFDSREEVEKIRKWHPKCSLLIR 2
           AASVGVNLTTFDS+EE++KIRKWH KC+LLIR
Sbjct: 133 AASVGVNLTTFDSKEELDKIRKWHSKCALLIR 164


>dbj|BAK32801.1| lysine/ornithine decarboxylase [Echinosophora koreensis]
          Length = 455

 Score =  209 bits (531), Expect = 2e-52
 Identities = 103/168 (61%), Positives = 126/168 (75%), Gaps = 3/168 (1%)
 Frame = -1

Query: 496 F*AMGSGTTSLQTVLGAPAVKGKKVTNLS---KDGLTDFILSNISSKQEVKDPFYVLDLG 326
           F A G+G  SL+ +  A  VKGK+VT LS   + G++ FI S I  K E+  PF VLDLG
Sbjct: 9   FQAKGAGPLSLKPLFSASGVKGKRVTALSAKEEGGISSFIQSIIHDKPEMDSPFLVLDLG 68

Query: 325 ILVSLMEKWTRTMPIVRPFYAVKCNPEPXXXXXXXXXXXXFDCASRAEIEAVLALGVSPD 146
           +++ LM+ WT  +P V+PFYAVKCNP P            FDCASRAEIE+VL+LGVSPD
Sbjct: 69  VVMDLMDNWTNNLPTVQPFYAVKCNPNPCLLGALAALGSSFDCASRAEIESVLSLGVSPD 128

Query: 145 RIVYANPCKAEAHIRYAASVGVNLTTFDSREEVEKIRKWHPKCSLLIR 2
           RI+YANPCK+E+HI+YAASVGVN+TTFDS+EE+EKIRKWHPKC LLIR
Sbjct: 129 RIIYANPCKSESHIKYAASVGVNVTTFDSKEEIEKIRKWHPKCELLIR 176