BLASTX nr result

ID: Coptis23_contig00038268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038268
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67157.1| hypothetical protein VITISV_039493 [Vitis vinifera]    51   1e-05

>emb|CAN67157.1| hypothetical protein VITISV_039493 [Vitis vinifera]
          Length = 845

 Score = 50.8 bits (120), Expect(2) = 1e-05
 Identities = 24/64 (37%), Positives = 37/64 (57%)
 Frame = -1

Query: 266 HKDWMSAPLNSDEYLDGLESFLKFMTDRLGKGTWCSCPCVRCRNVSGRVDPKIVADHLIR 87
           ++DWMS    S EY +G+E+F+ F        T   CPC+RC N+  +  P+++ +HL  
Sbjct: 3   NRDWMSKDRRSIEYDEGVENFINFALAHSTNHTSIKCPCLRCGNLLCQT-PQVIREHLFF 61

Query: 86  IGID 75
            GID
Sbjct: 62  NGID 65



 Score = 23.1 bits (48), Expect(2) = 1e-05
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 72 SYTTWYFHGE 43
          SY  WY+HGE
Sbjct: 67 SYRVWYWHGE 76


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