BLASTX nr result

ID: Coptis23_contig00036990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036990
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago t...    74   1e-11
emb|CBI28245.3| unnamed protein product [Vitis vinifera]               73   2e-11
emb|CAN64432.1| hypothetical protein VITISV_026342 [Vitis vinifera]    73   3e-11
ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782...    67   1e-09
ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago truncatula]
           gi|355510459|gb|AES91601.1| Telomere-associated protein
           RIF1 [Medicago truncatula]
          Length = 1121

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/98 (40%), Positives = 56/98 (57%)
 Frame = -1

Query: 296 DFKYINDMESVIGTEDPEVPEISCIKYMDMVSPTICLTILQFSMVAQSIQNASRMDIILQ 117
           D KYINDM+SV   +  +   ++CI YMD VSP + L +L F M+ Q      + D I Q
Sbjct: 571 DLKYINDMQSVDHNKHLKFLTVNCICYMDKVSPLVYLIVLYFHMMVQLTLKFQQSDHISQ 630

Query: 116 VMKKHLKLILSSCNPLEDLNAIICILYKHWDLAWLKIW 3
            M ++ K I SS N L++L     +LYKH +  +L IW
Sbjct: 631 GMSEYFKFIFSSSNLLDNLLTCTGLLYKHAEPIYLNIW 668


>emb|CBI28245.3| unnamed protein product [Vitis vinifera]
          Length = 860

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/98 (40%), Positives = 57/98 (58%)
 Frame = -1

Query: 296 DFKYINDMESVIGTEDPEVPEISCIKYMDMVSPTICLTILQFSMVAQSIQNASRMDIILQ 117
           D KYI+   SV      EV  I  I YMDM SP + LT+L   +   +  +A +M+ IL 
Sbjct: 586 DIKYIDRPLSVYDINHAEVLGIRSIAYMDMASPVVYLTMLYVYIAVHATFDAPKMEFILL 645

Query: 116 VMKKHLKLILSSCNPLEDLNAIICILYKHWDLAWLKIW 3
            ++KH K ++S  +PLE+L A I +LYKH  ++ L IW
Sbjct: 646 GVQKHFKFLMSLYDPLENLCATIVLLYKHMRVSCLNIW 683


>emb|CAN64432.1| hypothetical protein VITISV_026342 [Vitis vinifera]
          Length = 1138

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/98 (40%), Positives = 57/98 (58%)
 Frame = -1

Query: 296 DFKYINDMESVIGTEDPEVPEISCIKYMDMVSPTICLTILQFSMVAQSIQNASRMDIILQ 117
           D KYI+   SV      EV  I  I YMDM SP + LT+L   +   +  +A +M+ IL 
Sbjct: 609 DIKYIDRPLSVYDINHAEVLGIRSIAYMDMXSPVVYLTMLYVYIAVHATFDAPKMEFILL 668

Query: 116 VMKKHLKLILSSCNPLEDLNAIICILYKHWDLAWLKIW 3
            ++KH K ++S  +PLE+L A I +LYKH  ++ L IW
Sbjct: 669 GVQKHFKFLMSLYDPLENLCATIVLLYKHMRVSCLNIW 706


>ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782723 [Glycine max]
          Length = 1894

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/98 (39%), Positives = 54/98 (55%)
 Frame = -1

Query: 296 DFKYINDMESVIGTEDPEVPEISCIKYMDMVSPTICLTILQFSMVAQSIQNASRMDIILQ 117
           D KYI DM+SV   +  +   + CI YMD VSP I L  L F M+ Q  + + + D I Q
Sbjct: 581 DLKYIEDMQSVDHKKHLKFLGVGCISYMDKVSPLIYLIALYFHMMVQLTKKSHQSDHISQ 640

Query: 116 VMKKHLKLILSSCNPLEDLNAIICILYKHWDLAWLKIW 3
            M ++ K I  S + LE+L   I +LY+H    +L IW
Sbjct: 641 GMCEYFKFIFCSSDLLENLLTSIDLLYRHVRPIYLSIW 678


>ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|222866634|gb|EEF03765.1|
           predicted protein [Populus trichocarpa]
          Length = 1116

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/98 (32%), Positives = 56/98 (57%)
 Frame = -1

Query: 296 DFKYINDMESVIGTEDPEVPEISCIKYMDMVSPTICLTILQFSMVAQSIQNASRMDIILQ 117
           +F  I +++ V    + +   IS + YMDMVSP + L++L   +V  S      M+++LQ
Sbjct: 563 NFTCIENLQMVDNIRNVKYLGISSVAYMDMVSPLVYLSVLYICVVIPSTPATRGMELLLQ 622

Query: 116 VMKKHLKLILSSCNPLEDLNAIICILYKHWDLAWLKIW 3
            +++  K IL   +P+E+L+  + +LYKH +   L IW
Sbjct: 623 GLRRFFKTILLLYDPVENLSVAVGLLYKHMEFRHLDIW 660


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