BLASTX nr result

ID: Coptis23_contig00036970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036970
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61261.1| hypothetical protein VITISV_003240 [Vitis vinifera]   160   1e-37
ref|XP_002523183.1| protein binding protein, putative [Ricinus c...   159   2e-37
ref|XP_002264110.1| PREDICTED: probable LRR receptor-like serine...   158   4e-37
ref|XP_002264039.1| PREDICTED: probable LRR receptor-like serine...   158   4e-37
ref|XP_002300567.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32

>emb|CAN61261.1| hypothetical protein VITISV_003240 [Vitis vinifera]
          Length = 1561

 Score =  160 bits (405), Expect = 1e-37
 Identities = 83/149 (55%), Positives = 98/149 (65%)
 Frame = +3

Query: 57  PTSIVGIISLISLDISQNHFTGSLLENLTASIQSFNASYNDLSGPVPANLRRFPDSSFHP 236
           PTS+  + SL SLDISQN+FTG L  N + S++SFNASYNDLSG VP NLR+FP SSF P
Sbjct: 543 PTSMSEMNSLSSLDISQNNFTGPLPNNFSNSLESFNASYNDLSGTVPENLRKFPSSSFFP 602

Query: 237 GNPRLQLPNAPSGGDNVPPGYSRRKPIXXXXXXXXXXXXXXXXFILILVAIFIHYIRISR 416
           GN  L LP  P G  + P  +S+RKPI                 I IL+AIFIHYIR+SR
Sbjct: 603 GNSGLHLPGGPPGSTSSPSDFSKRKPIKTIIKVVIIVSCVVAVLIFILLAIFIHYIRLSR 662

Query: 417 RSTEENIASKDFRKSASSNPSVFTGRESG 503
           RST+E++  KD  K A  NPS F GRESG
Sbjct: 663 RSTQEHVTRKDIHKGAPQNPSGFNGRESG 691


>ref|XP_002523183.1| protein binding protein, putative [Ricinus communis]
            gi|223537590|gb|EEF39214.1| protein binding protein,
            putative [Ricinus communis]
          Length = 1060

 Score =  159 bits (403), Expect = 2e-37
 Identities = 84/167 (50%), Positives = 104/167 (62%)
 Frame = +3

Query: 3    LTGLHVXXXXXXXXXXXXPTSIVGIISLISLDISQNHFTGSLLENLTASIQSFNASYNDL 182
            LTGL V            P+S+ G+ SLI+LD+SQNHFTG +  NLT ++ SFN + NDL
Sbjct: 524  LTGLQVLSLAGNNLSGSLPSSMSGMTSLIALDLSQNHFTGPVPNNLTNTLGSFNVTNNDL 583

Query: 183  SGPVPANLRRFPDSSFHPGNPRLQLPNAPSGGDNVPPGYSRRKPIXXXXXXXXXXXXXXX 362
            SG VP NL +FPDSSFHPGN RL LP+ P G  N P   SRRKPI               
Sbjct: 584  SGFVPENLMKFPDSSFHPGNSRLHLPSGPPGSGNFPAENSRRKPINTIVKVVVIVSCVIA 643

Query: 363  XFILILVAIFIHYIRISRRSTEENIASKDFRKSASSNPSVFTGRESG 503
              +LI+ AIFIHYIRISRRS  +++ SK  R+  ++NPS  +G ESG
Sbjct: 644  VILLIMFAIFIHYIRISRRSPPDHVTSKGIRRHTATNPSGVSGTESG 690


>ref|XP_002264110.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g20940-like isoform 2 [Vitis vinifera]
          Length = 987

 Score =  158 bits (400), Expect = 4e-37
 Identities = 82/149 (55%), Positives = 98/149 (65%)
 Frame = +3

Query: 57  PTSIVGIISLISLDISQNHFTGSLLENLTASIQSFNASYNDLSGPVPANLRRFPDSSFHP 236
           PTS+  + SL SLDISQN+FTG L  N + S++SFNASYNDLSG VP +LR+FP SSF P
Sbjct: 529 PTSMSEMNSLSSLDISQNNFTGPLPNNFSNSLESFNASYNDLSGTVPESLRKFPSSSFFP 588

Query: 237 GNPRLQLPNAPSGGDNVPPGYSRRKPIXXXXXXXXXXXXXXXXFILILVAIFIHYIRISR 416
           GN  L LP  P G  + P  +S+RKPI                 I IL+AIFIHYIR+SR
Sbjct: 589 GNSGLHLPGGPPGSTSSPSDFSKRKPIKTIIKVVIIVSCVVAVLIFILLAIFIHYIRLSR 648

Query: 417 RSTEENIASKDFRKSASSNPSVFTGRESG 503
           RST+E++  KD  K A  NPS F GRESG
Sbjct: 649 RSTQEHVTRKDIHKGAPQNPSGFNGRESG 677


>ref|XP_002264039.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g20940-like isoform 1 [Vitis vinifera]
          Length = 1064

 Score =  158 bits (400), Expect = 4e-37
 Identities = 82/149 (55%), Positives = 98/149 (65%)
 Frame = +3

Query: 57  PTSIVGIISLISLDISQNHFTGSLLENLTASIQSFNASYNDLSGPVPANLRRFPDSSFHP 236
           PTS+  + SL SLDISQN+FTG L  N + S++SFNASYNDLSG VP +LR+FP SSF P
Sbjct: 546 PTSMSEMNSLSSLDISQNNFTGPLPNNFSNSLESFNASYNDLSGTVPESLRKFPSSSFFP 605

Query: 237 GNPRLQLPNAPSGGDNVPPGYSRRKPIXXXXXXXXXXXXXXXXFILILVAIFIHYIRISR 416
           GN  L LP  P G  + P  +S+RKPI                 I IL+AIFIHYIR+SR
Sbjct: 606 GNSGLHLPGGPPGSTSSPSDFSKRKPIKTIIKVVIIVSCVVAVLIFILLAIFIHYIRLSR 665

Query: 417 RSTEENIASKDFRKSASSNPSVFTGRESG 503
           RST+E++  KD  K A  NPS F GRESG
Sbjct: 666 RSTQEHVTRKDIHKGAPQNPSGFNGRESG 694


>ref|XP_002300567.1| predicted protein [Populus trichocarpa] gi|222847825|gb|EEE85372.1|
           predicted protein [Populus trichocarpa]
          Length = 998

 Score =  142 bits (359), Expect = 2e-32
 Identities = 79/163 (48%), Positives = 95/163 (58%)
 Frame = +3

Query: 3   LTGLHVXXXXXXXXXXXXPTSIVGIISLISLDISQNHFTGSLLENLTASIQSFNASYNDL 182
           L GL V            P+S+  + SLISLD+SQNHFTG L  NL+ SI SFN SYNDL
Sbjct: 467 LAGLQVLNLSGNNLSGSLPSSMADMSSLISLDLSQNHFTGPLPNNLSESIGSFNVSYNDL 526

Query: 183 SGPVPANLRRFPDSSFHPGNPRLQLPNAPSGGDNVPPGYSRRKPIXXXXXXXXXXXXXXX 362
           SG VP NLRRFP SSF+PGN RL LPN P G +N+P G    KPI               
Sbjct: 527 SGVVPENLRRFPSSSFYPGNNRLSLPNGPPGPNNLPGGNRGGKPINTIVKVVVIVACVTA 586

Query: 363 XFILILVAIFIHYIRISRRSTEENIASKDFRKSASSNPSVFTG 491
             ILI++AIFI YIRI RR+    + +   R+   +NPS  +G
Sbjct: 587 LIILIMLAIFILYIRIRRRNPPGQVTNTGIRRHIQTNPSGTSG 629


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