BLASTX nr result

ID: Coptis23_contig00036969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036969
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517118.1| PREDICTED: uncharacterized protein LOC100787...    73   2e-11
ref|XP_002276062.1| PREDICTED: leucine-rich repeat protein SHOC-...    73   3e-11
ref|XP_002306417.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002532476.1| leucine-rich repeat-containing protein, puta...    71   1e-10
ref|XP_003612416.1| Leucine-rich repeat-containing protein [Medi...    69   5e-10

>ref|XP_003517118.1| PREDICTED: uncharacterized protein LOC100787496 [Glycine max]
          Length = 574

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/46 (76%), Positives = 41/46 (89%)
 Frame = +2

Query: 65  SVDGVVEEIMRIHKSLPTRAGLEEIEAARALIQNVEKEEQSRLETI 202
           SVDGVVEEIMRIH+SLP R G++E+EAAR LI NVEKE+Q+RLE I
Sbjct: 6   SVDGVVEEIMRIHRSLPARPGIDEVEAARGLIGNVEKEDQARLEAI 51


>ref|XP_002276062.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Vitis vinifera]
           gi|296082577|emb|CBI21582.3| unnamed protein product
           [Vitis vinifera]
          Length = 557

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/52 (69%), Positives = 44/52 (84%)
 Frame = +2

Query: 47  MGSFLQSVDGVVEEIMRIHKSLPTRAGLEEIEAARALIQNVEKEEQSRLETI 202
           M S  +SVD VV EIMRIH+SLPTR G++E+EAAR LI+NVEKE+Q+RLE I
Sbjct: 1   MESSAKSVDDVVGEIMRIHRSLPTRPGIDEVEAARTLIRNVEKEDQARLEAI 52


>ref|XP_002306417.1| predicted protein [Populus trichocarpa] gi|222855866|gb|EEE93413.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/46 (73%), Positives = 41/46 (89%)
 Frame = +2

Query: 65  SVDGVVEEIMRIHKSLPTRAGLEEIEAARALIQNVEKEEQSRLETI 202
           SVD  VEEIMRIH+SLPTR G+EE+EAA+ LI+NVEKEEQ+R+E I
Sbjct: 1   SVDQAVEEIMRIHRSLPTRPGIEEVEAAKTLIRNVEKEEQARMEAI 46


>ref|XP_002532476.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223527801|gb|EEF29900.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 581

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/48 (66%), Positives = 42/48 (87%)
 Frame = +2

Query: 59  LQSVDGVVEEIMRIHKSLPTRAGLEEIEAARALIQNVEKEEQSRLETI 202
           ++S+D  VEEIMRIH+SLP R G+EE+EAA+ALIQNV+KE+Q R+E I
Sbjct: 13  IRSIDEAVEEIMRIHRSLPERPGIEEVEAAKALIQNVDKEDQGRIEAI 60


>ref|XP_003612416.1| Leucine-rich repeat-containing protein [Medicago truncatula]
           gi|355513751|gb|AES95374.1| Leucine-rich
           repeat-containing protein [Medicago truncatula]
          Length = 585

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/46 (69%), Positives = 40/46 (86%)
 Frame = +2

Query: 65  SVDGVVEEIMRIHKSLPTRAGLEEIEAARALIQNVEKEEQSRLETI 202
           SVDGVVEEIMRIH+SLP R G++E+EAA+ LI NVEKE+Q R ++I
Sbjct: 6   SVDGVVEEIMRIHRSLPVRPGIDEVEAAKGLILNVEKEDQLRFDSI 51


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