BLASTX nr result

ID: Coptis23_contig00036966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036966
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38747.1| unknown [Lotus japonicus]                              106   2e-21
ref|XP_004142637.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   104   8e-21
ref|XP_003523424.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   102   4e-20
gb|ACU21181.1| unknown [Glycine max]                                  102   4e-20
ref|XP_002285881.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   102   4e-20

>gb|AFK38747.1| unknown [Lotus japonicus]
          Length = 309

 Score =  106 bits (264), Expect = 2e-21
 Identities = 49/64 (76%), Positives = 56/64 (87%)
 Frame = -1

Query: 282 RRSIASFYNPSLKATIAPAPQLTIDPVTKEVEQAYPKFVFGDYMSVYSEQKFFPKEPRFQ 103
           RRS+ASFYNPSLKATI+PAPQL ++   +EVE  YP+FVFGDYMSVY+EQKF PKEPRFQ
Sbjct: 245 RRSVASFYNPSLKATISPAPQLVVEKENQEVEDTYPEFVFGDYMSVYAEQKFLPKEPRFQ 304

Query: 102 AVGA 91
           AV A
Sbjct: 305 AVRA 308


>ref|XP_004142637.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5-like
           [Cucumis sativus] gi|449500668|ref|XP_004161163.1|
           PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase
           5-like [Cucumis sativus]
          Length = 309

 Score =  104 bits (259), Expect = 8e-21
 Identities = 51/65 (78%), Positives = 57/65 (87%)
 Frame = -1

Query: 282 RRSIASFYNPSLKATIAPAPQLTIDPVTKEVEQAYPKFVFGDYMSVYSEQKFFPKEPRFQ 103
           RRSIASFYNPS++ATIAPA QL +D   +EVE+ YPKFVFGDYMSVY+EQKF PKEPRFQ
Sbjct: 246 RRSIASFYNPSMEATIAPAAQL-VDKANQEVEEGYPKFVFGDYMSVYAEQKFLPKEPRFQ 304

Query: 102 AVGAM 88
           AV AM
Sbjct: 305 AVRAM 309


>ref|XP_003523424.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5-like
           [Glycine max]
          Length = 308

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/65 (76%), Positives = 55/65 (84%)
 Frame = -1

Query: 282 RRSIASFYNPSLKATIAPAPQLTIDPVTKEVEQAYPKFVFGDYMSVYSEQKFFPKEPRFQ 103
           RRSIASFYNPS KATI PAPQL ++   ++V Q YPKFVFGDYMSVY+EQKF PKEPRFQ
Sbjct: 245 RRSIASFYNPSFKATICPAPQL-VEKEDQQVNQTYPKFVFGDYMSVYAEQKFLPKEPRFQ 303

Query: 102 AVGAM 88
           AV AM
Sbjct: 304 AVRAM 308


>gb|ACU21181.1| unknown [Glycine max]
          Length = 308

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/65 (76%), Positives = 55/65 (84%)
 Frame = -1

Query: 282 RRSIASFYNPSLKATIAPAPQLTIDPVTKEVEQAYPKFVFGDYMSVYSEQKFFPKEPRFQ 103
           RRSIASFYNPS KATI PAPQL ++   ++V Q YPKFVFGDYMSVY+EQKF PKEPRFQ
Sbjct: 245 RRSIASFYNPSFKATICPAPQL-VEKEDQQVNQTYPKFVFGDYMSVYAEQKFLPKEPRFQ 303

Query: 102 AVGAM 88
           AV AM
Sbjct: 304 AVRAM 308


>ref|XP_002285881.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5 [Vitis
           vinifera]
          Length = 311

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/67 (77%), Positives = 55/67 (82%), Gaps = 2/67 (2%)
 Frame = -1

Query: 282 RRSIASFYNPSLKATIAPAPQLT--IDPVTKEVEQAYPKFVFGDYMSVYSEQKFFPKEPR 109
           RRSIASFYNP LKATIAPAPQL    +    E+ QAYPKFVFGDYMSVY+EQKF PKEPR
Sbjct: 245 RRSIASFYNPPLKATIAPAPQLVEKANQDDLEIVQAYPKFVFGDYMSVYAEQKFLPKEPR 304

Query: 108 FQAVGAM 88
           F AVGAM
Sbjct: 305 FHAVGAM 311


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