BLASTX nr result

ID: Coptis23_contig00036963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036963
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533279.1| serine-threonine protein kinase, plant-type,...   104   8e-21
ref|XP_002281880.1| PREDICTED: probable LRR receptor-like serine...   101   5e-20
ref|XP_002326901.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_003544429.1| PREDICTED: leucine-rich repeat receptor prot...    94   1e-17
ref|XP_003538835.1| PREDICTED: probable receptor-like protein ki...    92   4e-17

>ref|XP_002533279.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223526904|gb|EEF29111.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 617

 Score =  104 bits (259), Expect = 8e-21
 Identities = 50/80 (62%), Positives = 62/80 (77%)
 Frame = -3

Query: 240 LMFNSQPRYNSVLTISKLTSSDPSELAIINNASTHTVFPTGKEVIVPVNCFCSGQYYQAN 61
           L++ SQP Y++V +ISKLTSSDP ELA+INN S  TV PT KEVIVP+ C CS QYYQAN
Sbjct: 59  LIYKSQPPYHTVSSISKLTSSDPLELALINNISNFTVLPTNKEVIVPIICSCSSQYYQAN 118

Query: 60  SSYVTLSRDDSYYTIANDTY 1
           +SY+  S  D+Y++IA  TY
Sbjct: 119 TSYIIPSIYDTYFSIAESTY 138


>ref|XP_002281880.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g07650-like [Vitis vinifera]
          Length = 622

 Score =  101 bits (252), Expect = 5e-20
 Identities = 49/80 (61%), Positives = 59/80 (73%)
 Frame = -3

Query: 240 LMFNSQPRYNSVLTISKLTSSDPSELAIINNASTHTVFPTGKEVIVPVNCFCSGQYYQAN 61
           L+F S+P YNSV TIS L SS+P ELA IN+  T TVFPTGKEVIVPVNC C GQYYQAN
Sbjct: 59  LIFKSEPPYNSVPTISMLMSSNPGELARINSVKTLTVFPTGKEVIVPVNCSCLGQYYQAN 118

Query: 60  SSYVTLSRDDSYYTIANDTY 1
           +++       +Y+ I N+TY
Sbjct: 119 TTFHIQDNQQTYFIIGNNTY 138


>ref|XP_002326901.1| predicted protein [Populus trichocarpa] gi|222835216|gb|EEE73651.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/80 (57%), Positives = 58/80 (72%)
 Frame = -3

Query: 240 LMFNSQPRYNSVLTISKLTSSDPSELAIINNASTHTVFPTGKEVIVPVNCFCSGQYYQAN 61
           L+F SQP +NSV +IS LTS++  ELA INN +  + FPT  EVIVPVNCFC GQYYQAN
Sbjct: 59  LIFKSQPSFNSVPSISALTSANQEELARINNVTRLSEFPTNNEVIVPVNCFCFGQYYQAN 118

Query: 60  SSYVTLSRDDSYYTIANDTY 1
           ++    +   +YY IAN+TY
Sbjct: 119 TTIQVTTTRGTYYVIANETY 138


>ref|XP_003544429.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like
           [Glycine max]
          Length = 636

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/81 (56%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
 Frame = -3

Query: 240 LMFNSQPRYNSVLTISKLTSSDPSELAIINNASTHTVFPTGKEVIVPVNCFC-SGQYYQA 64
           L+F S+P +NS+ TIS LTSS+P ELA IN+ +   VFPTGKEVIVP+NC C + +YYQA
Sbjct: 61  LIFKSKPPFNSITTISNLTSSNPEELARINDVTVLKVFPTGKEVIVPLNCSCLTREYYQA 120

Query: 63  NSSYVTLSRDDSYYTIANDTY 1
            + YV L +  +Y+T+ANDT+
Sbjct: 121 ETKYV-LGQSPTYFTVANDTF 140


>ref|XP_003538835.1| PREDICTED: probable receptor-like protein kinase At1g49730-like
           [Glycine max]
          Length = 634

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/80 (58%), Positives = 56/80 (70%)
 Frame = -3

Query: 240 LMFNSQPRYNSVLTISKLTSSDPSELAIINNASTHTVFPTGKEVIVPVNCFCSGQYYQAN 61
           L F SQP YNSV TIS L  SDPS+LA IN+ S +  F T K VIVPVNC CSG+YYQ N
Sbjct: 61  LTFRSQPIYNSVKTISTLLGSDPSQLAKINSVSMNDTFETNKLVIVPVNCSCSGEYYQTN 120

Query: 60  SSYVTLSRDDSYYTIANDTY 1
           +SYV     ++Y  IAN+T+
Sbjct: 121 TSYV-FQNSETYLLIANNTF 139


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