BLASTX nr result

ID: Coptis23_contig00036945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036945
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556769.1| PREDICTED: uncharacterized membrane protein ...   127   7e-28
ref|XP_002524593.1| conserved hypothetical protein [Ricinus comm...   123   2e-26
ref|XP_002266938.1| PREDICTED: uncharacterized membrane protein ...   121   7e-26
ref|XP_003601496.1| Membrane protein, putative [Medicago truncat...   120   9e-26
ref|XP_003601502.1| Membrane protein, putative [Medicago truncat...   118   6e-25

>ref|XP_003556769.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine
           max]
          Length = 580

 Score =  127 bits (320), Expect = 7e-28
 Identities = 63/98 (64%), Positives = 76/98 (77%)
 Frame = -2

Query: 361 LDEREEACLKNLIMSYNNETPEDWNNTRFPSDDNVKRAQLQAIIRRLQGIVASMTRIPTF 182
           L+E EE CLK L+M   NE PE+W++T FPSDD V+RAQLQAIIRRLQGIVASM+R+PTF
Sbjct: 466 LEETEETCLKELVMKCKNELPEEWDSTGFPSDDTVRRAQLQAIIRRLQGIVASMSRMPTF 525

Query: 181 RRHFRNLVKVLYVEAIESVALACQDGGNSKSKTRSKKS 68
           RR FRNL+KVLY+EA+++ A A   GG    K R K S
Sbjct: 526 RRRFRNLIKVLYIEALQAGASASHIGGTLIPKHREKGS 563


>ref|XP_002524593.1| conserved hypothetical protein [Ricinus communis]
           gi|223536146|gb|EEF37801.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 586

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/98 (63%), Positives = 75/98 (76%)
 Frame = -2

Query: 361 LDEREEACLKNLIMSYNNETPEDWNNTRFPSDDNVKRAQLQAIIRRLQGIVASMTRIPTF 182
           LDE EEACLK +IM   NE  EDW++  FPS+DN++RAQLQ IIRRL+GIV+SMTRIPTF
Sbjct: 461 LDENEEACLKRIIMKCQNEKLEDWDDFGFPSNDNLRRAQLQGIIRRLEGIVSSMTRIPTF 520

Query: 181 RRHFRNLVKVLYVEAIESVALACQDGGNSKSKTRSKKS 68
           RR F NL+KVLYVEAI++ A +    G+SK K   K S
Sbjct: 521 RRRFMNLMKVLYVEAIQAAASSGHSRGSSKFKHAGKSS 558


>ref|XP_002266938.1| PREDICTED: uncharacterized membrane protein At3g27390 [Vitis
           vinifera] gi|296085066|emb|CBI28481.3| unnamed protein
           product [Vitis vinifera]
          Length = 585

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/92 (64%), Positives = 72/92 (78%)
 Frame = -2

Query: 361 LDEREEACLKNLIMSYNNETPEDWNNTRFPSDDNVKRAQLQAIIRRLQGIVASMTRIPTF 182
           LDE EE CLK L+M Y NE PE+W++  FPS DNV+RAQLQAIIRRLQGIV S++RIPTF
Sbjct: 459 LDENEEGCLKKLVMDYKNEKPEEWDDAGFPSKDNVRRAQLQAIIRRLQGIVTSLSRIPTF 518

Query: 181 RRHFRNLVKVLYVEAIESVALACQDGGNSKSK 86
           RR F  LVK+LY+EA++S  LA Q   +S S+
Sbjct: 519 RRRFTGLVKMLYMEAVQSGVLANQVVNSSNSE 550


>ref|XP_003601496.1| Membrane protein, putative [Medicago truncatula]
           gi|355490544|gb|AES71747.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 557

 Score =  120 bits (302), Expect = 9e-26
 Identities = 58/88 (65%), Positives = 74/88 (84%)
 Frame = -2

Query: 361 LDEREEACLKNLIMSYNNETPEDWNNTRFPSDDNVKRAQLQAIIRRLQGIVASMTRIPTF 182
           L+E EE CLK L+M   N+ PEDW++T FPS DNV+RAQLQAIIRRLQGIV+SM+R+PTF
Sbjct: 467 LEESEETCLKELVMRSKNDIPEDWDSTGFPSKDNVRRAQLQAIIRRLQGIVSSMSRMPTF 526

Query: 181 RRHFRNLVKVLYVEAIESVALACQDGGN 98
           RR FRNLVK+LY+EA+++ A A ++G N
Sbjct: 527 RRKFRNLVKILYIEALQASASA-KEGNN 553


>ref|XP_003601502.1| Membrane protein, putative [Medicago truncatula]
           gi|355490550|gb|AES71753.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 580

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/88 (64%), Positives = 73/88 (82%)
 Frame = -2

Query: 361 LDEREEACLKNLIMSYNNETPEDWNNTRFPSDDNVKRAQLQAIIRRLQGIVASMTRIPTF 182
           L+E EE CLK L+M   N+ PEDW++T FPS DNV+RAQLQAIIRRLQGI +SM+R+PTF
Sbjct: 490 LEESEETCLKELVMRSKNDIPEDWDSTGFPSKDNVRRAQLQAIIRRLQGIGSSMSRMPTF 549

Query: 181 RRHFRNLVKVLYVEAIESVALACQDGGN 98
           RR FRNLVK+LY+EA+++ A A ++G N
Sbjct: 550 RRKFRNLVKILYIEALQASASA-KEGNN 576


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