BLASTX nr result

ID: Coptis23_contig00036939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036939
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ96383.1| hypothetical protein [Prunus persica]                  107   3e-26
emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]   117   1e-24
emb|CCH50966.1| T4.5 [Malus x robusta]                                105   7e-24
emb|CAN66359.1| hypothetical protein VITISV_018312 [Vitis vinifera]   106   1e-22
emb|CAN81140.1| hypothetical protein VITISV_007978 [Vitis vinifera]   104   2e-22

>gb|ABJ96383.1| hypothetical protein [Prunus persica]
          Length = 193

 Score =  107 bits (267), Expect(2) = 3e-26
 Identities = 48/93 (51%), Positives = 66/93 (70%)
 Frame = -1

Query: 441 GSNPISWSAKKQSTVSRSSTESEYRXXXXXXXXLYWLCLISQDLHLHLNASPTLWCGNIG 262
           G N +SWSAKKQ TV+RSSTE+EYR        + WL  + Q+L    + SP LWC N+G
Sbjct: 63  GCNLVSWSAKKQHTVARSSTEAEYRAIANTSTEITWLRSLLQELGFSTSTSPVLWCDNLG 122

Query: 261 ALALASNPVFHARTKHIEVDYYYTRELVTSGAL 163
           A  L++NP+FHARTKH+E+DY++ R+ V++G L
Sbjct: 123 ATYLSANPIFHARTKHVEIDYHFVRDQVSAGKL 155



 Score = 36.2 bits (82), Expect(2) = 3e-26
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = -3

Query: 175 KWSTSLKNTQDLLTDIFTKGLSSPRFYLLKSKLSIATQS 59
           K S    +T+D L DI TK LSSPRF  ++ KL +  +S
Sbjct: 154 KLSVQFISTKDQLADIMTKPLSSPRFTFIRDKLRVHERS 192


>emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]
          Length = 879

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/91 (60%), Positives = 70/91 (76%)
 Frame = -1

Query: 444  FGSNPISWSAKKQSTVSRSSTESEYRXXXXXXXXLYWLCLISQDLHLHLNASPTLWCGNI 265
            FGS  ISW+AKKQS V+RSSTE+EYR        LYW+ ++ ++LH+ L  +PT+WC N 
Sbjct: 784  FGSCLISWTAKKQSVVARSSTEAEYRALTITTAELYWIRMLLKELHISLPTAPTIWCDNS 843

Query: 264  GALALASNPVFHARTKHIEVDYYYTRELVTS 172
            GALALASNPVFHARTKHIEVD+++ RE V +
Sbjct: 844  GALALASNPVFHARTKHIEVDFHFIREKVAN 874


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  105 bits (262), Expect(2) = 7e-24
 Identities = 50/91 (54%), Positives = 63/91 (69%)
 Frame = -1

Query: 441  GSNPISWSAKKQSTVSRSSTESEYRXXXXXXXXLYWLCLISQDLHLHLNASPTLWCGNIG 262
            GSN ISWSAKKQ+TV+RSSTE+EYR        + W+C I  D+   L  +P ++C N  
Sbjct: 1523 GSNLISWSAKKQATVARSSTEAEYRSLANTAAEITWVCKILHDISFPLLKTPVIYCDNKS 1582

Query: 261  ALALASNPVFHARTKHIEVDYYYTRELVTSG 169
             +ALA NPVFHARTKH+E+DY+Y RE V  G
Sbjct: 1583 VIALAFNPVFHARTKHVEIDYHYIREKVLLG 1613



 Score = 30.0 bits (66), Expect(2) = 7e-24
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -3

Query: 139  LTDIFTKGLSSPRFYLLKSKLSIATQSKA*GGVIE 35
            + DIFTK L++ RF  L SKLS+ + S +  G ++
Sbjct: 1626 IADIFTKPLAADRFAALTSKLSVRSPSFSLRGCVK 1660


>emb|CAN66359.1| hypothetical protein VITISV_018312 [Vitis vinifera]
          Length = 542

 Score =  106 bits (264), Expect(2) = 1e-22
 Identities = 50/88 (56%), Positives = 63/88 (71%)
 Frame = -1

Query: 441 GSNPISWSAKKQSTVSRSSTESEYRXXXXXXXXLYWLCLISQDLHLHLNASPTLWCGNIG 262
           G N ISWSAKKQ  VS+SSTE+EYR        +YWL ++  +L + L+  P +WC NI 
Sbjct: 394 GPNLISWSAKKQPVVSKSSTEAEYRCLALVTAEVYWLRMLLCELEISLDXXPVIWCDNIS 453

Query: 261 ALALASNPVFHARTKHIEVDYYYTRELV 178
           ALALASN +FHAR+KHIEVDY++ RE V
Sbjct: 454 ALALASNXIFHARSKHIEVDYHFVREKV 481



 Score = 25.0 bits (53), Expect(2) = 1e-22
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 133 DIFTKGLSSPRFYLLKSKLSI 71
           DIFTKG ++  F  L+ KL+I
Sbjct: 499 DIFTKGHTADXFCFLRDKLAI 519


>emb|CAN81140.1| hypothetical protein VITISV_007978 [Vitis vinifera]
          Length = 791

 Score =  104 bits (259), Expect(2) = 2e-22
 Identities = 48/88 (54%), Positives = 63/88 (71%)
 Frame = -1

Query: 441 GSNPISWSAKKQSTVSRSSTESEYRXXXXXXXXLYWLCLISQDLHLHLNASPTLWCGNIG 262
           G N ISWSAKKQ  VS+SS E+EYR        +YWL ++  +L + L++ P +WC NI 
Sbjct: 643 GPNLISWSAKKQPVVSKSSIEAEYRCLALVTAEVYWLRMLLCELEISLDSPPVIWCDNIS 702

Query: 261 ALALASNPVFHARTKHIEVDYYYTRELV 178
           ALALASNP+FHAR+KHI+VDY++  E V
Sbjct: 703 ALALASNPIFHARSKHIKVDYHFVHEKV 730



 Score = 26.2 bits (56), Expect(2) = 2e-22
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 133 DIFTKGLSSPRFYLLKSKLSI 71
           DIFTKG +  RF  L+ KL+I
Sbjct: 748 DIFTKGHTVDRFCFLRDKLAI 768


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