BLASTX nr result

ID: Coptis23_contig00036934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036934
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   100   9e-20
ref|XP_004153596.1| PREDICTED: uncharacterized protein LOC101220...    96   4e-18
ref|XP_004152997.1| PREDICTED: glyoxysomal fatty acid beta-oxida...    96   4e-18
ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. l...    88   8e-16
ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...    87   1e-15

>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/87 (57%), Positives = 66/87 (75%)
 Frame = -2

Query: 263 LLEKLYLVLCKVHLHRFPDSLKSLVQTVSEIPVSALEFYDNLGTYTRLTHLCYKILSGLL 84
           +LE+L LVL  +HL RFPDSLKSLVQTV+EIP  ALE   N  ++ +LTHLC ++L+ +L
Sbjct: 184 VLERLQLVLGLIHLDRFPDSLKSLVQTVAEIPAMALELCGNTASFDKLTHLCSRVLTEVL 243

Query: 83  RPEHGNETDTAVQVLKALTPSILLLKS 3
             EHG++  TA +VLK+L+P ILL KS
Sbjct: 244 SSEHGDQATTAAEVLKSLSPLILLAKS 270


>ref|XP_004153596.1| PREDICTED: uncharacterized protein LOC101220407, partial [Cucumis
           sativus]
          Length = 500

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/84 (53%), Positives = 65/84 (77%)
 Frame = -2

Query: 266 PLLEKLYLVLCKVHLHRFPDSLKSLVQTVSEIPVSALEFYDNLGTYTRLTHLCYKILSGL 87
           P+LE+L +++  +HL RFPDSLKSL++TV +IPV ALE   NL  Y++ T  C +ILS +
Sbjct: 182 PVLERLEILMSVIHLDRFPDSLKSLIETVIDIPVLALEICTNLSIYSKFTDFCSRILSAM 241

Query: 86  LRPEHGNETDTAVQVLKALTPSIL 15
           LRPE G+ ++TAV+V+K+L+P IL
Sbjct: 242 LRPEDGDLSNTAVEVIKSLSPLIL 265


>ref|XP_004152997.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
           protein MFP-a-like [Cucumis sativus]
          Length = 501

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/84 (53%), Positives = 65/84 (77%)
 Frame = -2

Query: 266 PLLEKLYLVLCKVHLHRFPDSLKSLVQTVSEIPVSALEFYDNLGTYTRLTHLCYKILSGL 87
           P+LE+L +++  +HL RFPDSLKSL++TV +IPV ALE   NL  Y++ T  C +ILS +
Sbjct: 71  PVLERLEILMSVIHLDRFPDSLKSLIETVIDIPVLALEICTNLSIYSKFTDFCSRILSAM 130

Query: 86  LRPEHGNETDTAVQVLKALTPSIL 15
           LRPE G+ ++TAV+V+K+L+P IL
Sbjct: 131 LRPEDGDLSNTAVEVIKSLSPLIL 154


>ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316038|gb|EFH46461.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1315

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/86 (58%), Positives = 60/86 (69%)
 Frame = -2

Query: 263 LLEKLYLVLCKVHLHRFPDSLKSLVQTVSEIPVSALEFYDNLGTYTRLTHLCYKILSGLL 84
           +LEKL  VL  VHL RFPDSLKSLVQTVSEIP+ ALE Y     Y RL  LC KIL G+L
Sbjct: 164 VLEKLGSVLNFVHLDRFPDSLKSLVQTVSEIPLLALE-YSGFLNYERLMELCGKILGGVL 222

Query: 83  RPEHGNETDTAVQVLKALTPSILLLK 6
             +HG+   TA ++ K+LTP +L+ K
Sbjct: 223 NSDHGDMALTAAEISKSLTPLLLMGK 248


>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/87 (48%), Positives = 63/87 (72%)
 Frame = -2

Query: 263 LLEKLYLVLCKVHLHRFPDSLKSLVQTVSEIPVSALEFYDNLGTYTRLTHLCYKILSGLL 84
           +LEKL  V+  +HL+RFP++LKSL+QTV+EIPV++L+   N   Y+RL  LC  +L  +L
Sbjct: 163 VLEKLVKVMGLIHLNRFPETLKSLIQTVAEIPVTSLDTCGNAAVYSRLLSLCSHVLKEVL 222

Query: 83  RPEHGNETDTAVQVLKALTPSILLLKS 3
           + EHG  ++TA +VLK+L   +L+ KS
Sbjct: 223 KSEHGEPSNTAAEVLKSLCSLVLMAKS 249


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